Thermobacillus composti: Theco_1332
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Entry
Theco_1332 CDS
T02394
Name
(GenBank) formamidopyrimidine-DNA glycosylase Fpg
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
tco
Thermobacillus composti
Pathway
tco03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Theco_1332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tco03400
]
Theco_1332
Enzymes [BR:
tco01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Theco_1332
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Theco_1332
DNA repair and recombination proteins [BR:
tco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Theco_1332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AGA57496
UniProt:
L0ECS8
LinkDB
All DBs
Position
1400812..1401744
Genome browser
AA seq
310 aa
AA seq
DB search
MPELPEVETVARTLNALVAGKTIRAVTVRLPRIIQRPEEPEAFAAALEGRTIRSIGRRGK
FLRFVLDDLVLVSHLRMEGRYSVCPADEPIEKHTHVLFHLTDGTDLRYKDVRQFGTMHLF
RPGEEFEQPPLSKLGMEPLDDAFTVEALRKLLGGRKAPIKPLLLNQAYVTGLGNIYVDES
LHKAGIHPERPASSLRAAEWTRLHASIRETLREAVDAGGSSVRSYVNGQGEMGMFQFRLY
VYGREDEPCRTCGTPIVKTVLGGRGTHVCPVCQPYRKARGRRPAGKAPAAIPRRMAGDAA
AAAADVTSHS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgcctgaagtcgagaccgtggcgcgcacgctgaacgcgctggtcgccggc
aagacgatccgcgccgttacggtgcggctgccccgcatcattcagcggccggaagagccg
gaggcgttcgccgcggcgctcgagggccgaacgatccggagcatcggacggcgcggcaag
tttctgcggttcgtgctggacgacctggtgctggtctcgcatctgcgcatggaagggcgg
tacagcgtctgtccggcggacgagccgatcgagaagcatacccatgtgctgtttcatctg
acggacggcacggatctccggtacaaggatgtgcgccagttcggcacgatgcatctgttt
cggccgggcgaggaattcgagcagccgccgctgagcaagctggggatggagccgcttgac
gatgcctttaccgtggaagcgctgcgcaagctgctcggcggccgcaaggcgccgatcaag
ccgctgctgctgaatcaggcgtatgtcacgggactgggcaacatctatgtcgacgagtcg
ctgcacaaggccggcatccatccggagcggccggcatcgtcgctgcgcgccgccgaatgg
acgcggctgcacgcttcgatccgcgagacgctgcgggaggcggtggacgcgggcggttct
tccgtccggtcttatgtgaacggccagggcgagatggggatgttccagttccgcctgtat
gtttacggccgggaagacgagccgtgccggacatgcggcacgccgattgtgaagacggtc
ctcggcgggcgcggaacccatgtctgcccggtctgccagccgtaccggaaagcccggggc
cgcagaccggccggcaaggcgcccgccgccattccgcggcggatggccggggacgcggcc
gcagcggcggcggatgtgacttcgcactcctaa
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