Thermobacillus composti: Theco_1426
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Entry
Theco_1426 CDS
T02394
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tco
Thermobacillus composti
Pathway
tco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Theco_1426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tco03019
]
Theco_1426
03009 Ribosome biogenesis [BR:
tco03009
]
Theco_1426
Enzymes [BR:
tco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Theco_1426
Messenger RNA biogenesis [BR:
tco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Theco_1426
Ribosome biogenesis [BR:
tco03009
]
Prokaryotic type
rRNA helicases
Theco_1426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGA57581
UniProt:
L0ED17
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All DBs
Position
1495234..1496787
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AA seq
517 aa
AA seq
DB search
MKTFAEFGLEPKVLQAVTEMGFEESTPIQAKAIPIAMSGADLIGQAQTGTGKTAAFGIPL
ISKIPPEEERIVALVMTPTRELAIQVADELGKLARYKGIRTLPIYGGQDIGRQIRALKKK
PQIIIGTPGRLLDHINRKTIRLDDVQTVVLDEADEMLDMGFMEDITTILSLVPEERQTML
FSATMPPNIQKLAQQFLRNPEHVSVIPKNITAPSIEQIYIEVHEREKFEALSRLLDMESP
DLAIVFGRTKRRVDELSEALQKRGYSADGLHGDLSQNQRDTVMRKFRDGSIDVLVATDVA
ARGLDVSGVTHVINFDLPQDPESYVHRIGRTGRAGKEGVAYTFVTPREIDHLHFIERVTR
QRIARRPLPSLAEAIEGKQRVTAERLIEIIQQDDFAEYKGIAIQLLEQYDSVHLVAAAMK
LLTGEKKDVEIELTPEDPIRAKKRRPDIRSSGRRFGGAVGGYGGRNSRSGGRGNGYGGGR
GGYGDSGRGYGRSEGGRQRAGGRSYGDVRRSRGWSEE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacattcgctgaattcggcctggagccgaaagtgctgcaggccgttaccgaaatg
ggtttcgaggaatcaacgccgattcaggcgaaagccattccgattgcgatgagcggagcc
gacctgatcggacaagcgcagacgggtaccgggaagacggccgcattcggcatcccgctc
atcagcaagattccgccggaggaagagcggatcgtcgccctcgtcatgaccccgacccgc
gaactcgcgattcaggtggctgacgaattgggcaaactcgcccggtacaaaggcatccgc
acgctgccgatctacggcggacaggacatcggcagacagatccgcgcgctgaagaagaag
ccgcagatcatcatcggcacgccgggacggctgctcgaccacatcaaccggaagacgatc
cggctggacgatgtccaaacggtcgtgctggacgaagccgacgaaatgttggacatgggc
ttcatggaggatattacgacgattctcagcctggtgccggaagagcgccagacgatgctt
ttctccgcgacgatgcctcccaacatccaaaagcttgcacagcaattcctgcgcaacccc
gagcatgtgtcggtcattccgaagaacattaccgctccgagcattgagcagatctacatt
gaagtgcatgaacgggaaaaattcgaggcgctcagccggctgctcgacatggaatcgccc
gatctggcgattgtgttcggccgcacgaagcgccgcgtggacgaactgagcgaagcgctg
cagaagcgcggctattccgcggacgggctgcacggcgacctgtcgcagaaccagcgcgac
accgtcatgcgcaagttccgcgacggcagcatcgatgtcctcgtcgcgacggacgttgcc
gcgcgcggtctcgacgtctccggggttacgcacgtcatcaactttgacttgccgcaggat
ccggaaagctatgttcaccggatcggccgtaccggccgcgcgggcaaggaaggcgtcgcc
tatacgttcgtgacgccgcgcgagatcgaccatctgcacttcatcgaacgggtgacgcgc
cagcgcatcgcgcgccgtccgctgccgagccttgccgaggcgatcgaagggaagcagcgc
gtgacggctgaacggctgatcgagatcatccagcaggacgatttcgccgaatacaaaggc
atcgcgattcagctgctggaacagtacgattcggtccacctggtcgcggcggcgatgaag
ctactgaccggcgagaagaaggatgtcgaaatcgagctgacgccggaagatccgatccgc
gcgaagaagcgcagaccggatatccgttcgagcgggcgccggtttggcggtgccgtcggc
ggttacggcggaagaaattcccgcagcggcggccgcggcaacggatacggcggcggcaga
ggcggatacggcgattccgggagaggctacggccgctccgagggtggccgtcagcgcgca
ggcggacgcagctatggcgacgttcgccggtcgcgcggctggtccgaggaataa
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