Thermobacillus composti: Theco_2029
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Entry
Theco_2029 CDS
T02394
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tco
Thermobacillus composti
Brite
KEGG Orthology (KO) [BR:
tco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tco03009
]
Theco_2029
Enzymes [BR:
tco01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Theco_2029
Ribosome biogenesis [BR:
tco03009
]
Prokaryotic type
ribosomal protein modification factors
Theco_2029
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Collar
Motif
Other DBs
NCBI-ProteinID:
AGA58151
UniProt:
L0EEN5
LinkDB
All DBs
Position
complement(2111441..2112769)
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AA seq
442 aa
AA seq
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MREKVSVVTLGCDKNLVDSEIMSGLVLERGYELVDRPEDATVVIVNTCGFIDAAKEESVN
TILELAELKETGRLKALIVSGCLTQRYKEELMKEMPEIDGIVGTGDFHHIADIVADALGG
KKPVRVGHPAFDYDQALPRRVMTPRYTAYVKIAEGCDNACTFCSIPLMRGKFRSRSIESI
VREVESLAAQGVKEICLIAQDSTNYGTDLYGTFKLPELLNRVSEVEGIAWVRLHYAYPGF
FTDELIETFASNPKICNYFDIPLQHSEDLILKRMRRPGRQRDARELIAKIRARMPDAAIR
TSLIVGFPGETEEDFERLCDFVREMKFDRLGVFTYSKEEDTPAARLPDHVPDDVKEYRAA
ALMEVQREVSKETAAKRIGQVIDVLVERYDGRSDVYVGRSPYDAPEVDGEVFITGCRPEI
GSIQRVRITHAFEFDLSGEGVV
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagagagaaagtgagcgttgtcacgctcggctgcgacaaaaacctcgtcgattcggag
attatgtccggcctggtgcttgagcgcggttatgaactggtcgaccgtccggaagacgcg
acggtcgttatcgtgaatacatgcggtttcatcgacgcggcgaaggaagaatcggtgaat
acgattctggaactggccgaactgaaggagacgggaaggctgaaggcgctcatcgtttcg
ggctgcctgacgcagcggtacaaggaagaattgatgaaagagatgcccgagatcgacggc
atcgtcgggacgggcgatttccatcatatcgccgatatcgtggccgatgcgctcggcggg
aagaagccggtgcgggtggggcacccggccttcgactacgaccaggcgctgccgcgccgg
gtcatgacgccgcgctataccgcatatgtgaaaattgcggagggctgcgacaacgcctgc
acgttctgcagcattccgctgatgcgcggcaagttccgcagccgctcgatcgagtcgatc
gtccgtgaagtcgagtcgctcgcggcccagggcgtgaaggaaatctgcctcatcgcccag
gattccaccaattacggcacggatctgtacggaacgttcaagctgcccgaattgctgaac
cgcgtcagcgaagtcgaaggcatcgcctgggttcggctccattacgcctatcccgggttt
ttcacggatgagctgatcgagacgttcgcttccaatccgaaaatctgcaactacttcgac
attccgctgcagcacagcgaggatctcattctgaagcggatgcgcaggcccggacggcag
cgcgacgcccgcgagctgatcgcgaagatccgcgcgcgaatgccggacgccgcgattcgc
acgtcgctcatcgtgggcttcccgggcgagacggaggaagatttcgagcggctgtgcgat
ttcgtccgcgagatgaagttcgaccggctcggcgtgttcacttactcgaaggaagaggat
acgccggcggcaagactgccggatcatgttccggatgacgtgaaggaataccgggcggcg
gcgctgatggaagtgcagcgcgaagtgtcgaaggagaccgccgccaagcggatcgggcaa
gtgatcgacgtgctggtcgaaagatacgacgggcggagcgacgtctacgtcggccgctcc
ccttacgacgcgccggaggtggacggcgaagtgtttatcaccggatgccgtccggagatc
ggttcgattcagcgcgtgcgcatcacgcatgctttcgagtttgacctgtcgggggaggga
gtggtgtga
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