Thermobacillus composti: Theco_2076
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Entry
Theco_2076 CDS
T02394
Name
(GenBank) RNA polymerase sigma factor, FliA/WhiG family
KO
K02405
RNA polymerase sigma factor FliA
Organism
tco
Thermobacillus composti
Pathway
tco02020
Two-component system
tco02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tco00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Theco_2076
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Theco_2076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tco03021
]
Theco_2076
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tco02035
]
Theco_2076
Transcription machinery [BR:
tco03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Theco_2076
Bacterial motility proteins [BR:
tco02035
]
Flagellar system
Flagellar assembly proteins
Stator
Theco_2076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
UPF0122
HTH_23
HTH_38
HTH_16
PhyR_sigma-like
7TMR-HDED
PCI
Motif
Other DBs
NCBI-ProteinID:
AGA58198
UniProt:
L0ED46
LinkDB
All DBs
Position
complement(2161739..2162524)
Genome browser
AA seq
261 aa
AA seq
DB search
MIQPKTSRLSNVELWQQWKEHRDIEAKKQLIEYYLPLVEYVSNRMAIGLPKNVSKDDLTS
NGVMGLIDAIEKFDHRRGLQFETYASWRIRGAMIDGLRQGDWVPRSVREKAKKIEEAYAH
LEQQLLRSVTDAEVSAYLNVSEREFQQMLQEIAVTTVCSLEDPIREEESETRLSMLVDEK
AKNPDYKVQEHFLKETLIKGIERLTEKERIVISLFYYEELSLSEIAEVMSLSPSRISQLH
SKAILRLRGALDKQKKQLLEN
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgattcaaccgaagacgtcccgtctgtccaacgtcgaactgtggcagcagtggaaagag
caccgcgatatcgaagcgaagaagcagttgatcgaatactatttgccgctcgtggaatat
gtgtcgaaccggatggcgatcggcctgccgaagaatgtatccaaggacgatctcaccagc
aacggcgtcatggggctgatcgatgccatcgagaaattcgatcaccggcgggggctgcaa
ttcgagacctatgcttcctggcggattcggggcgccatgattgacggcctccgccaggga
gactgggtgccccggtccgtccgcgagaaagccaagaaaatcgaagaggcgtacgcgcat
ctggagcagcagcttcttcgttccgtcaccgacgcggaagtgagcgcctacctgaacgtg
tcggaacgggagtttcagcagatgctgcaggagattgcggtgacgacggtctgttcgctc
gaagatccgatccgcgaagaagagtcggagacgcggctgtccatgctggtggatgagaag
gcgaaaaatccggactacaaagtgcaagaacatttcctgaaggagacgctcatcaaaggc
atcgaacggttgacggagaaggagcgcatcgtcatctcgctgttttattatgaagagctt
tcgctgagcgaaatcgccgaagtgatgtcgctttcgccttcacgcatatcccagctgcat
tcgaaagccattttgcgtctgcggggggcgctcgacaagcagaagaagcagctgctcgag
aactga
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