Thermobacillus composti: Theco_2201
Help
Entry
Theco_2201 CDS
T02394
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
tco
Thermobacillus composti
Pathway
tco03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tco00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Theco_2201
09124 Replication and repair
03420 Nucleotide excision repair
Theco_2201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tco03021
]
Theco_2201
03400 DNA repair and recombination proteins [BR:
tco03400
]
Theco_2201
Enzymes [BR:
tco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Theco_2201
Transcription machinery [BR:
tco03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Theco_2201
DNA repair and recombination proteins [BR:
tco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Theco_2201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
Motif
Other DBs
NCBI-ProteinID:
AGA58321
UniProt:
L0EF65
LinkDB
All DBs
Position
complement(2282019..2283725)
Genome browser
AA seq
568 aa
AA seq
DB search
MHAAGGPLIVRSDASVLLDVRHPDAEQARESIARFAELVKRPGDLHTYRITPLSVWNAAA
SGLTADEMTDDLIAFSRYDVPAGLIDRIGTWAGRYGKIRLEADGEQLALAADRDLAAELE
GLGLLPEDGVPAPDGRIRWRVPPERRGEVKRELTRSGFPVLDLAGYRRGGQLDVELKAAT
SSGAPFQLRDYQERAVDLFCREEAGAGGSGVIVLPCGAGKTIVGIAALARLRCEALILTP
SVTSVQQWRSELLDKTTLTERDIGVYAGSERQVRPVTIATYSILTCRNSKTEDYRHMILF
SERDWGLIIYDEVHLLPVPVFRMTADLQAKRRLGLTATLVREDGREEDVFSLIGPKRFDL
FWKTLEAKGWIARVTCTEIRVPLDPSAAAEYAAAGQRARIRIAAENPAKLRVVRELLALH
RGRQVLIIGQYLRQLKQMAAAWDVPLITGETGLDERDRLYARFRSGEEPVLIVSKVANLA
VDLPDAAVAVQVSGSYGSRQEEAQRIGRIMRPKPGSNECWFYTVVTEGTKETEYARRRQL
FLAEQGYAYRIMRMPETDGAARTEAAGC
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcggccggcggtccgttgattgtgagaagcgacgcttccgtgctgctggatgtc
cggcatccggatgcggagcaggcgcgcgaatcgatcgcccgctttgccgaactggtgaag
cggccgggagatctgcacacctaccgcattacgccgctgtccgtctggaatgcggcggca
tccggtctgacggcggatgagatgaccgacgacctgatcgctttcagccggtacgatgtt
cccgcgggattgatcgaccggatcgggacttgggccggacgttacggcaaaatccgactg
gaggcggacggagaacaacttgcccttgcagctgaccgcgatctcgccgccgagctggaa
gggcttggcctgttaccggaggacggggttccggctccggacggaaggatcaggtggcgt
gtgccgcccgagcggcgcggcgaagtgaagcgcgaactgacgagaagcggctttccggtg
ctcgatctcgccggttaccgccggggcgggcagcttgatgtcgagctgaaggccgccaca
tcgtccggggcgcccttccaactgcgcgactatcaggagcgcgcggtcgacctgttctgc
cgggaagaagccggagcgggcggcagcggcgtcatcgtgctgccctgcggcgcggggaag
accatcgtcggcatcgcggcgctggcgaggctccgctgcgaagcgctcattctgacgccc
agcgtgacgtcggttcaacaatggcggtccgagctgcttgacaaaacgacgctgacggag
cgcgacatcggcgtatatgcgggcagcgagcgccaggtgcggccggtgacgatcgcaacc
tactcgattctcacctgccggaattcgaagacggaagattaccgccatatgatactgttc
agcgagcgggactggggactcatcatctacgacgaagtgcatctgctcccggtgccggta
ttccgcatgacggcggatctgcaggcgaagcggcggctcggcctgacggccacccttgtc
cgcgaagacgggagggaagaagacgtgttctcgctgatcggaccgaaacggttcgatttg
ttctggaagacacttgaagcgaaaggctggatcgcccgggtgacctgcacggagatccgc
gtgccgctcgatccgtccgccgccgcggaatatgcggccgcaggccagcgggcgcgcatc
cggatcgcggccgagaacccggccaagctgcgcgtcgtccgcgagctgctcgccctgcac
cgcggccggcaggtgctgatcatcggccaatatttgcgccagctcaaacagatggccgcc
gcatgggacgtgcctctgatcaccggcgagaccggccttgacgaacgtgatcggctgtac
gctcgcttccgtagcggggaagagccggttctgatcgtctcaaaggtggccaatctcgcc
gtcgatctgccggatgccgccgttgccgtgcaagtttcgggcagctacggatcgcgccag
gaagaagcgcagcggatcggccggatcatgcggccgaaaccgggttcgaacgaatgctgg
ttctacaccgtcgtcacggaagggacgaaggagacggaatacgcgcgcaggcggcagctt
ttcctggccgagcagggttacgcctatcggattatgcgcatgccggaaacggacggcgcg
gcaagaacggaggcggcgggatgctga
DBGET
integrated database retrieval system
