Thermobacillus composti: Theco_2387
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Entry
Theco_2387 CDS
T02394
Name
(GenBank) helicase-exonuclease AddAB, AddB subunit
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
tco
Thermobacillus composti
Brite
KEGG Orthology (KO) [BR:
tco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tco03400
]
Theco_2387
Enzymes [BR:
tco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Theco_2387
DNA repair and recombination proteins [BR:
tco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Theco_2387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AGA58495
UniProt:
L0EH62
LinkDB
All DBs
Position
complement(2478169..2481777)
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AA seq
1202 aa
AA seq
DB search
MKLRFVLGRAGTGKTRHCLDEVRARLAEAPDGPPLILLVPEQATFTTEYALLGTPGVPGT
MRAQALSFRRLAFRVMQETGGTALVPIGENGKNMLLFKLLHRHADRLRLFAGSAGQRGFV
DKLNELLTEMKRYGVTPESLETLAADAALASPDGLLERKLHDIRLLYAELESALAGRYLD
AEDGLAYLARRFGASSLAAAEIWVDGFHGFTPAEYAALETMIRCARSVTVTLTLDRPYGP
GEQPPELDLFRPTAETYIRLRELAERSDVPVEPPFVLRPEPAPRWADSPMLAHLERHYGS
RTPMAVPEDWFDPEHPRCGVVIRAAANRRAEVDAAARDILRRVQEDGLRWRDIAVMVRNL
ADYADLIEQTFSDYGIPFFLDRKSVIPHHPLVEFIRSALETVTGGWRHDAVIRCIKTELL
TGPDSGVDRSDLDRLENYVLAAGIDGRRWLDPGSWRPLVRDPLEDEPGPAEEEDPDAFRR
LLQCRERIVAPLDRFGRALARARDVRAMCAALYDLLDAVGAADRLEAWSLEDAENGELLR
SRAHRQLWDGVMSLLDQLVELAGEERMPADLFAGMVETGLDSLQLGSVPPSVDQVLVGSL
ERSRTGGVLAGYLLGANEGVLPMRSREDGVLTERERERLEDGGIRMAPGARRRLLDERFL
IYGVLTMPSRTLWISCAMADEEGKALYPSELIRQVRTLFPKLPVLTETGEPDADGGAEEH
LRHIRRPDRALSLLVGQLRRFKESGRLPDLWRDIYNWFAERPEWRDRLAAVVSSLRYRNE
APPLLPVTALRLYGDRLLASVSRMERFTACPFQHFAAYGLKLEERRLYRLEAPDVGQLFH
AALSRLADTYGGRLGEATREEIAKTVSDIVDSLVPRLQSRILMSSSRYGFIARRLKQTIT
RTAAALAEHARRGLFAPVGLEIAFGPGGKLPPLVLPAGSGRSVEVIGRIDRVDAAETEDG
LLLRIIDYKSSAQALRLEDVVFGLTLQLLTYMDALLTHAPAWLGKPADPAGVLYFHVHDP
LISAYAPLPGEEVRRQTLRRYKTRGLLSADERIIRMMDRELETGRSDLVPAGLKKDGGFY
SDSAVVTREEWNVLRGAVRRTIERIGSRILDGEVAIAPYRQGNRTPCAFCPYKPVCHFDP
LIEGNGYKRIARIPKERIWDLLREGTDAEKAPVGPSVSDGAAAGGGLAGGGGNGVVESGG
EG
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctgcgattcgtgctcggacgcgcgggaacgggcaagacgcgccattgtctggac
gaagtgcgcgccagactggcggaagcgcccgacggaccgccgctcatcctgctcgtgccc
gagcaggcgacgttcacaaccgaatatgcgcttctcggaacgcccggcgtgcccggcacg
atgcgggcgcaggcgctcagcttccgccgcctggcgttccgcgtcatgcaggagacggga
ggaacggcgctcgtcccgatcggcgagaacgggaagaacatgctgctgttcaaattgctc
catcgccacgccgaccgtttgcgcctgttcgctggcagcgcggggcagcgcggttttgtc
gacaagctgaacgaactgctgaccgagatgaagcggtacggcgtgacgccggaaagcctt
gaaacgctggcggcggacgccgcgctggcatctccggacgggctgctcgagaggaaattg
cacgacatccggctgctctacgccgaactggagagcgcgcttgccggtcgatatctggac
gccgaagacggccttgcgtaccttgcgcggcgattcggcgccagcagcctcgcggcggcc
gaaatctgggtcgacggcttccatggctttacgccggccgaatacgccgcgctggagacg
atgatccgctgcgcgcggagcgtgaccgtcaccctgaccctcgaccggccttacggaccg
ggtgaacagccgcccgagctcgatttgttccggccgacggccgagacgtacatacggctt
cgggagcttgccgaacgatcggacgtgcccgtggagccgccgttcgtgcttcggccggaa
ccggccccccgctgggccgacagcccgatgctcgcgcatctggagcgccattacggcagc
cggacgccgatggccgtgccggaagattggtttgatccggagcatccgcgctgcggggtt
gtaatccgcgccgcggcgaaccggcgcgccgaagtcgacgctgccgcgcgggacatcctg
cgccgcgtgcaggaggacgggcttcgctggcgcgacatcgcggtcatggtgcgaaatttg
gccgattatgccgatctgatcgagcagacgttctccgattacggcatcccgtttttcctc
gaccggaaatccgtcatcccgcatcacccgcttgtcgagttcatccggtccgcgctcgag
acggtgaccgggggctggcggcacgacgccgtcatccggtgcatcaagacggagctcttg
acgggtccggattccggcgtcgaccggagcgatctggaccggctggagaactacgtgctc
gccgcgggcatcgacggccgcagatggctggatccgggaagctggcggccgctggtgcgc
gatccgctggaggacgaaccgggccctgcggaagaagaagatccggatgcgttccggcgg
ctgttgcaatgccgggaacggatcgtcgccccgctcgaccggttcggccgggcgctcgcc
cgcgcccgggatgtccgggcgatgtgcgcggcgctgtatgatctgctcgatgcggtcggt
gcggcggatcggctggaagcatggagcctggaggacgcggagaacggcgaattgctccgg
tcgcgggcgcatcgccagctgtgggacggcgtcatgagcctgctggatcagctggtcgag
ctcgcgggcgaagagcggatgccggccgatctgttcgcgggcatggtcgagacgggactg
gacagcctgcagctcggcagcgtgccgccgtcggtcgaccaggtgctggtcggcagtctg
gaaaggtcgcgcacgggcggcgtgctggccggctatctgctcggcgcgaacgaaggcgtg
ctgccgatgcggtcccgcgaagacggcgtgctgaccgagcgggagcgggagcggctcgag
gacggcggcatccggatggcgcccggcgcccgccgcaggctgctggacgagcggtttctg
atctacggcgtgctgaccatgccttcacgcacgctgtggatcagctgcgccatggcggac
gaggaaggaaaggcgctgtatccttcggaattgatccgccaggtccggacgctgttcccg
aagcttccggtactgaccgaaacgggcgagccggacgcggacggcggcgcggaggagcat
ctgcgccatatccgccggcccgaccgcgcgctgtcgctgctggtcggccagctccgccgc
ttcaaggagagcggccggctgccggatctgtggcgcgacatttacaactggtttgccgaa
cggccggaatggcgggatcggctggcggcggtcgtctcgtcgctccgctatcggaacgaa
gcgcctccccttcttcccgtgacggcgctccgcctgtacggcgaccggctgctggcgagc
gtatcgcgcatggagcggttcacggcatgcccgttccagcatttcgccgcctacggattg
aagctggaggaacggcggctgtaccggctggaggcgccggatgtggggcagctgttccac
gcggcgctttcccggctggcggatacatacggcgggcggttgggcgaggcgacccgggaa
gaaattgcgaagacagtttccgacatcgtggacagcctggtaccccgcctgcaatcccgc
attctcatgagcagcagccgctacggcttcatcgcgcgcaggctcaagcagacgatcacc
cggacggcggcggcgctcgccgagcatgcgcggcgcggcctgttcgcgccggtcgggctg
gagatcgccttcggccccggcggcaagctgccgccgctcgtgctgccggccggatccggc
cggtccgtcgaggtcatcggccggatcgaccgcgtcgatgcggccgagacggaggacgga
ctgctgctgcgcatcatcgactacaaatcgtcggcgcaggccttgcgcctggaagacgtc
gtcttcggccttacgctgcagctgctgacctacatggacgcgctgctcacccatgccccg
gcatggctcggcaagccggccgatccggcgggcgtgctctatttccacgtgcacgatccg
ctgatctccgcgtacgctccgctgccgggcgaagaggtgcgccggcagacgctgcggcgc
tacaagacgcggggattgctgtcggcggatgagcggatcatccggatgatggaccgggag
ctggagacgggacgctcggatctggtgccggccgggctcaagaaagacggcggattctac
agcgactcggccgttgtgacgcgggaggaatggaacgtgctgcgcggcgccgtccgccgg
acgatcgaacggatcggcagccgcatactggacggcgaagtcgcgattgcgccataccgg
caggggaaccggacgccgtgcgcgttctgtccgtacaagccggtgtgccatttcgacccg
ctgatcgaaggcaacgggtacaagcgcatcgcccggattccgaaggaacggatatgggac
ttgctgcgcgagggaacggatgccgagaaagcgccggtcggtccgtccgtgtcggacgga
gccgccgcgggcggcggtttggccggaggcggcgggaacggcgttgtggaaagcggaggt
gaaggatga
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