Thermobacillus composti: Theco_3161
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Entry
Theco_3161 CDS
T02394
Name
(GenBank) putative transcriptional regulator
KO
K19449
XRE family transcriptional regulator, master regulator for biofilm formation
Organism
tco
Thermobacillus composti
Brite
KEGG Orthology (KO) [BR:
tco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tco03000
]
Theco_3161
Transcription factors [BR:
tco03000
]
Prokaryotic type
Helix-turn-helix
XRE family
Theco_3161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_19
HTH_26
HTH_31
Phage_CI_repr
HTH_25
MarR
HTH_24
Rrf2
HTH_IclR
Sigma70_r4
HTH_AraC
HTH_10
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AGA59217
UniProt:
L0EHE4
LinkDB
All DBs
Position
complement(3328087..3328512)
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AA seq
141 aa
AA seq
DB search
MDSSVNGKSGTVVQPRDKRGRGMIGTNINHFRTQSGISLSELAERAGISKSYLSSIERNL
KQNPSIQVIEKIALVLNVDLKTLLQVNLPDPEAKETPDEEWYAFVEALRQAGIEKDNVQD
YKILIEFIKWYQERKQERKQG
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atggacagcagcgtgaacgggaagagcgggaccgtcgtgcagccgcgggataagaggggg
cgcggaatgatcgggacgaacatcaaccatttccgcacccagagcggtatttcgctgtcg
gagcttgccgagcgcgccggcatttcgaagtcgtacctgtccagcatcgagcgcaatctg
aagcagaacccgtccattcaggtgatcgagaaaatcgcgctcgtgctcaacgtggacctg
aaaacgctgctgcaggtcaacttgccggacccggaagcgaaggagacgcccgacgaagag
tggtacgccttcgtcgaagcgctcaggcaggccggcatcgagaaggacaatgtgcaggat
tacaagattctcatcgagttcatcaagtggtatcaggaacggaaacaggaacgaaaacag
ggatga
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integrated database retrieval system
