Thermobacillus composti: Theco_3196
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Entry
Theco_3196 CDS
T02394
Name
(GenBank) putative transcriptional regulator
KO
K19449
XRE family transcriptional regulator, master regulator for biofilm formation
Organism
tco
Thermobacillus composti
Brite
KEGG Orthology (KO) [BR:
tco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tco03000
]
Theco_3196
Transcription factors [BR:
tco03000
]
Prokaryotic type
Helix-turn-helix
XRE family
Theco_3196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SinI
HTH_3
HTH_31
HTH_19
DUF1611_N
HTH_26
Phage_CI_repr
HTH_25
HTH_IclR
HTH_37
HTH_35
HTH_10
MarR
Motif
Other DBs
NCBI-ProteinID:
AGA59251
UniProt:
G4EKV7
LinkDB
All DBs
Position
3363771..3364118
Genome browser
AA seq
115 aa
AA seq
DB search
MQRTRRLMESIGARIKAIRTQRRMSLSELAEAAGVAKSYLSNVERGIQNNPSIQFIEKMA
STLRVPVHVLLFGEADPEGALDPEWTELVREAMASGVDKEQFREFLEYQKWRKSQ
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaggacgagacggctaatggaaagcattggagcaagaatcaaggccatccggacg
cagcgccggatgtcgctgtcggaattggccgaagcggcaggcgtggccaaatcctatctc
agcaatgtcgaacgggggatccaaaacaatccgtccatccaatttatcgagaagatggct
tccaccctccgcgtgccggtccatgtcctgttgttcggcgaggcggatccggaaggcgcg
cttgaccccgaatggacggagcttgtccgggaagcgatggcgtccggcgtcgacaaagag
cagttccgggaatttctcgagtaccagaaatggcgaaaatcgcaatag
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