Thermobacillus composti: Theco_3310
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Entry
Theco_3310 CDS
T02394
Name
(GenBank) DNA/RNA helicase, superfamily II, SNF2 family
Organism
tco
Thermobacillus composti
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
DEAD_2
Motif
Other DBs
NCBI-ProteinID:
AGA59361
UniProt:
L0EI52
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Position
3500482..3503478
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AA seq
998 aa
AA seq
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MAMKMDLGAIDVRLSLTEDGDALLYGLDGTGGFVPGMRLKQLLFAWHEDSFYGTELEIRS
LRNIEIVELPAEFVIPFFAELPLLGHVDWAWGGEAELLRRLAPALMACAAAKRYAPSREA
MAAGRLEWQWEDREIDRRIDALVASGEADDDFGRRLRAAFTAAVFDRHYGTEERAADLRR
EFPRLFEPGAGEAARSLSDDDWLVHIGWRQDTAPFRPALQLIEPGPIDAEWRLRIVLQDK
ERPDALVPVRLDPDGHVSGGWPEEWTDAVRGRADGWLKRLRAALPDLAPDGGWQPEGTAL
DDAAAWRFLSADSVRLIAAGWQVLLPAWWEEARRARPRLRARIRSDAGEGPSLFGLESLV
DFDWRIALGSAELSEQEFLELAARGRRLVRVRGQWVALDPAMLPVIRKAMAQYDPSRGLS
FRDVLQLHLLGGAAGDDAPEDGGAEAGAAAEEARVALEVELSGRLLRLIGQLGRPEDNPL
LPAPEGLKTALRPYQQIGFSWLASLRRFGLGACLADDMGLGKTVQLIAYLLHAREEMRAA
GRMMPSLIVCPTSVIGNWQKELARFAPSLRVLLHYGGGRPSGAEFREAAEAADVVLTSYT
TAALDRKTLAAVSWDAVCLDEAQNIKNYATKQAAAVRSFPARHRIALTGTPIENRLAELW
SIFDFLNPGYLGSQRAFNERYGGAALKEGGDARLAELRKLVKPFLLRRKKQDPAVQLDLP
EKNEMKTYVHLTAEQAAWYERTVRELLDRSGELTGIERKGAILAAITRLKQLCAHPALVT
KEPLPAVRPVFDADGDGRPQATDGPAVDVAALAARSEKLERLLEMVRELREAGERCLIFT
QYVGMGRLIQAVLQETLGEPVLYLHGGTPRAMRERMIEMFQSNALPAGRQPHVFVLSLKA
GGVGLNLTAASHVFHYDRWWNPAVENQATDRAYRIGQVKNVHVYKLIALGTLEERIDEML
ESKRQLSETVMAGSGNWITELSTEELRELVTLRRDLVR
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgaaaatggacctgggtgcgatcgatgtccggctcagcctgacggaggacggc
gatgcgctgctctacggactcgacggaaccggcggattcgtgccgggcatgcggctgaaa
caactgctgttcgcctggcacgaagactcgttctacggcacggaactggaaatccgcagc
ctgcggaacatcgagatcgtcgaattgccggcggagttcgtcattccgttcttcgcggag
ctgccgctgctggggcatgtggactgggcatggggcggcgaggccgagctgctccggcgg
ctggcccccgccctgatggcgtgcgcggcggcgaagcggtatgcgccgagccgcgaagcg
atggcggcgggccggcttgagtggcaatgggaagaccgggagatcgaccggcggatcgac
gcgctggtcgcgtcgggcgaagccgacgatgatttcggccggcggctccgcgccgcgttc
acggcggccgtcttcgaccggcattacggcacggaggaacgggcggccgacctgcgccgg
gaatttccgcgcctcttcgaaccgggcgccggcgaggcggcgaggagcctgagcgatgac
gactggctcgtccacatcggctggcggcaggacaccgcgccgttccgtcctgcgctgcag
ctcatcgagcccggtccgatcgatgccgaatggcggctccggatcgtgctgcaggacaag
gaacgccccgatgcgctcgtgcccgtccggctcgatccggacggccatgtctccggcggc
tggccggaggaatggacggacgccgtgcgcgggcgggccgacggctggctcaagcggctg
cgcgccgccctgccggacctggcgccggacggcgggtggcagccggaaggcacggcgctg
gatgacgcggcggcctggcgcttcctcagcgcggacagcgtccggctgatcgccgcgggc
tggcaggtgctgctgcctgcctggtgggaggaagcccgccgcgcgcggccgcgcctgcgc
gcccgcatccggtcggacgccggcgaaggtccgtcgctgttcggcctggagtcgctcgtc
gatttcgactggcgcatcgccttggggagcgccgagctctcggagcaggagttcctcgag
ctggccgcccgcgggcggcggctcgtccgcgtccgcggacagtgggtcgcgctcgatccg
gcgatgctgcccgtcatccgcaaggcaatggcgcagtacgatccgtcccgcggcctgtcg
ttccgcgacgtgctgcagctgcatctgctcggcggcgcggccggcgatgacgcgccggag
gacggcggagcggaagccggcgccgcggccgaagaagcccgcgtcgcgctcgaggtggag
ctgagcggccgcctgctccggctgatcgggcagctcggccgtccggaggacaatccgctg
ctgccggcgccggaagggctcaagaccgcgctgcgcccgtaccagcagatcgggttctcg
tggctcgcctcgctgcggcgcttcggcctcggcgcctgcctcgcggacgacatggggctc
ggcaagacggtgcagctcatcgcctacctgctgcatgcgcgggaggagatgcgggccgcc
ggccggatgatgccttcgctcatcgtctgcccgacatcggtgatcggcaactggcagaag
gaactcgcccgcttcgcgccatcgctgcgcgtgctgctgcattacggcggcggacggcct
tcgggagccgaattccgcgaagcggccgaggcggcggacgtcgtgctgacgtcgtacacg
acggcggcgctcgaccggaagacgctcgccgccgtctcctgggacgcggtctgcctcgac
gaggcgcagaacatcaagaactacgcgacgaaacaggccgcggccgtgcgcagtttcccg
gcgcgccaccggatcgcgctcaccggcacgccgatcgagaaccggctcgccgagctgtgg
tcgatcttcgacttcctcaatccgggatacctcggcagccagcgggcgttcaacgagcgc
tacggcggcgccgccctgaaggaaggcggcgatgcgcggctggccgagctccgcaagctg
gtgaagccgttcctgctccggcgaaagaagcaggaccccgccgtgcagctcgacctgccg
gagaagaacgagatgaagacctacgtgcatctgacggccgagcaggccgcatggtatgag
cggacggtgcgggaattgctggatcggtcgggcgagctgaccgggatcgaacggaagggc
gccatcctggcggcgatcacgaggctgaagcaattgtgcgcgcatccggcgctggtgacg
aaggagccgctgccggccgtgcgcccggtattcgacgcggacggagatggccggccgcag
gcgacggacggacccgcggtggacgttgcggcgctcgccgcccggtcggagaagctggag
cggctgctcgagatggtgcgggaactgcgggaagcgggcgaacgatgcctcattttcacc
cagtatgtcggcatgggcaggctgatccaggcggtgcttcaggaaacgctcggcgagccg
gtgctctatctgcacggcggcacgccccgggccatgcgcgagcggatgatcgagatgttc
cagtcgaacgcgctgcccgccggcaggcagccgcatgtgttcgtcctgtcgctgaaagcc
ggcggcgtcgggctgaatctgacggcggccagccacgtcttccattacgaccgctggtgg
aatccggccgtcgagaaccaggcgaccgaccgcgcctatcggatcggacaggtgaagaac
gtccacgtttacaagctcattgcgctcggcacgctggaggagcggattgacgagatgctg
gaaagcaagcggcagctgagcgagacggtgatggccggctccgggaactggatcaccgag
ctgtcgacggaggagctcagggagcttgtcacgctgcggcgcgatctggtgcggtaa
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