Thermobacillus composti: Theco_3544
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Entry
Theco_3544 CDS
T02394
Name
(GenBank) DNA-directed RNA polymerase, delta subunit
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
tco
Thermobacillus composti
Pathway
tco03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tco00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Theco_3544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tco03021
]
Theco_3544
03400 DNA repair and recombination proteins [BR:
tco03400
]
Theco_3544
Transcription machinery [BR:
tco03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Theco_3544
DNA repair and recombination proteins [BR:
tco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Theco_3544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF4777
Motif
Other DBs
NCBI-ProteinID:
AGA59572
UniProt:
L0EIC7
LinkDB
All DBs
Position
complement(3765588..3766169)
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AA seq
193 aa
AA seq
DB search
MSGEIRLKLDPERIEEMPMVDLAFEILKTANEPMYYRDLIQEIGRIRGFSEEKINEVIAQ
IYTEINIDGRFACVGSNVWGLKRWYPVDRSEDPSLGASRPRIINDDDEEEEDLYGDEEEA
YVTDEEDYDLYDEDGEELFDDADDEADVDEEVPIDDEELDEPDIEVDDELETEDEEEFED
DAEDLEAEDEDDL
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgagattcgattgaagctcgatcccgaacggattgaagaaatgccgatggtc
gatctggccttcgaaattctgaaaacagccaacgagccgatgtactaccgggatttgatc
caggagatcggcaggatccgcggcttttccgaggagaaaatcaacgaagtcatcgcgcag
atttatacggagatcaacatcgacggccggttcgcctgcgtcggttccaacgtgtggggg
ctgaagcggtggtacccggttgaccggagcgaagatccgtccctcggggcgtcgcgtccg
cgcatcatcaacgatgatgacgaagaggaagaggatctgtacggcgacgaggaagaagca
tacgttacggacgaagaagattacgacctctacgacgaggacggcgaagagctgttcgac
gacgccgacgacgaagcggatgtggacgaggaagttccgatcgacgacgaagagctcgac
gagccggatatcgaagtcgacgacgaactggagacggaggacgaggaagagttcgaggac
gacgcggaagacctcgaggccgaagacgaagacgacctgtga
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