KEGG   Thermobacillus composti: Theco_3569
Entry
Theco_3569        CDS       T02394                                 
Name
(GenBank) Lhr-like helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
tco  Thermobacillus composti
Brite
KEGG Orthology (KO) [BR:tco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tco03400]
    Theco_3569
Enzymes [BR:tco01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Theco_3569
    5.6.2.6  RNA 3'-5' helicase
     Theco_3569
DNA repair and recombination proteins [BR:tco03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Theco_3569
SSDB
Motif
Pfam: DEAD_assoc DEAD WH_Lhr WH4_Lhr Helicase_C WH3_Lhr ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: AGA59597
UniProt: L0EIF1
LinkDB
Position
3791685..3796316
AA seq 1543 aa
MTDFGGQPLPPELEGFHPVLAQWFFRSFGEPTPVQREAWDAIRTGHHALIAAPTGSGKTL
AALLPCLDHCIRTKTGQGAGSGVKVVYITPLKALNNDIHHHIAEFAEAIDRLAAESGQPW
PGLRAAVRTGDTTGAQRAAMLRRPPDVLVTTPESLYILLLSEKGRRMLRTTEKVIVDEIH
DLAADKRGAHLSLTLERLADLCPARIQRIGVSATQKPLARVARFLAGWEEPREALPVPGD
GGRSAAPADAGAAEEFAHPYGYRPRPVKIVESRMERKIELTVTLPGQPPGSRKIELVWKP
IVERLMQLMEGARSVIIFVNSRRLAERLTLHLNDHAGFEMSMSHHGSVSRERRLEIERRL
KSGDLRVIVATSSLELGIDIGHVDLVIQLDSPLSAAAGIQRFGRAGHAVGGVSRGAIVAR
TLEQLPEIAVLTRRIIERDIEPIEPPRDPLDVLSQHVVAMAAASPDALAVNELHRLIIRS
DSFRSFPPERLHAALLVLGGRYPFVRPLIEYDSLTGRISRRGSSAMAALTGAGTIPQSSG
YPVHHAETRVRLGELDEEYIEESRVGDVFQLGTSSWRIQSIRQDRVYAVEAGNRYSEIPF
WRNEGPGRSYELGQAVGRLWAELERRLTAGGGAAGSAVETAEHVDGAAAREAVNPSEGQA
ADFGGPDNGSGTGGQAAADAETIDWLSRSFHLDGGAASGLAALVRSQHAHGGVPTDKRLL
VEYYRDVTGRWHVVMHNHWGKRVNRTWLLAIRHVLEQAMGQQVYAHARDGGIELVLPEWG
PAWLDAVRQVTPDNVERLLREAIAGSPLFAVSFRRIAETSLLLQRSFRRTPMWQKRIRSE
ELLREALPYAEQFPYLHEAMRCTLHDELDLPNLLDALRSLADGTIRIVMRETAHPSPLAS
AFVSDYAMKQLYEGDQLSGDLQLQLIEINKRLAGELFGEEALRRAVRPEAIEEERRRLAE
PGPGGPPADPDGLYALLKRRGDSSADELAAWAGGRTAEWLRALERDGRIAPLEFGGIVRW
ICADERDLYREFPATPASVAFVAGRWTEQVLSFTMADLIGRYPQLSPVQARAVIDELLLQ
ERIEPSPIAGDDEGEAWMSSRIASRILRRSVREARREAEPLEPERWLLEAAALQYALPGA
RLAGESGLLAVIGRLQGLFLPLELWETVIFPSRLTAYRGELLDALCASGEVIWTARRESG
ADQVQVAFFLAESRELYVPVLRESAGRPVKHPELLDRLRDGGAAFLTKLAREFDRLPSEL
LSDLLDLVRDGHVSNDQFAPLRLALTAKPAKTAKTAQTGAARGLPRTGSGHGRWYALSDL
LQDADAPQADVPQETSVMAWTRHLLDGFGVLAKETADHWSPFGWDVLLPVLRQLETMGIV
TRGLFVRGVQTMQFVSRERVASLRRPPVEAGAEDDVTVLAASDPASPFGLLAPWPQRPGA
AFARRSGNFLVLRGGEWLLWIEGYGRSVSTMRAPEDIGEDALADTMRRAFRTIMQMTKRS
KIRIASLNGEPAAESPEAASLLQSVGAERDARAMTVWLSSLGR
NT seq 4632 nt   +upstreamnt  +downstreamnt
atgacggatttcggcgggcagccgctgccgccggagctggaggggttccatccggttctc
gcgcaatggttcttccgttccttcggagaaccgactcccgtgcagcgggaggcttgggac
gccatccgcacgggacatcacgcgctgattgccgcgccgaccggttccgggaagacgctg
gcggcgctcctgccctgcctcgatcattgcatccggacgaagaccgggcaaggcgccggt
tccggcgtgaaagtcgtctatatcacgccgctgaaagccctgaacaatgacattcatcac
cacattgccgaattcgccgaggcgatcgaccggctggccgcggaatccggacagccctgg
cccggcctgcgcgcggccgtccgcaccggcgacacgaccggggcgcagcgcgccgcgatg
ctgcggcggccgccggacgtgctcgtgacgacgccggagtcgctgtatatcctgcttctg
tcggagaagggccggcggatgctgcggacgacggagaaagtgatcgtcgacgagatccac
gatctggccgcggacaagcgcggcgcgcatctgtcgctgacgctcgaacggctcgctgac
ctctgcccggcgcggatccagcggatcggcgtgtcggcgacgcagaagccgcttgcgcgc
gtcgcccgcttcctcgccggctgggaagagccccgggaggcgctgcccgtgccgggagac
ggcggccggtccgccgcgccggctgatgcgggcgcggccgaagaatttgcgcacccgtac
ggataccggccgcggcccgtcaagatcgtggagagccggatggagcggaagatcgagctg
acggtgacgcttcccgggcagccgccgggcagccggaagattgaactcgtctggaagccg
atcgtcgagcgcctgatgcagctgatggaaggcgcccgatccgtcatcatcttcgtgaac
agccggcggctggccgaacggctgacgcttcacctgaacgaccatgccgggttcgagatg
tcgatgtcgcatcacggcagcgtcagccgcgagcgccggctggagatcgagaggcggctg
aaatcgggcgatctgcgcgtcatcgtcgccacctcgtcgctggagctgggcatcgacatc
ggtcatgtcgacctcgtgatccagctcgattcgccgctctccgcggcggccggcatccag
cggttcggcagggcgggccatgccgtcggcggtgtaagccgcggggcgatcgtcgcgcgc
accctcgaacagctgcccgagatcgccgtgcttacccggcggatcatcgagcgcgacatc
gagccgatcgagccgccccgggatccgcttgacgtgctgtcgcagcacgtcgtcgcgatg
gcggccgcatcgccggacgcgctcgccgtgaacgagctgcatcggctcatcatccgcagc
gacagcttccggtcgttcccgccggagcggctgcacgccgcgctgctcgtgctcggcgga
cgatatccgttcgtgcggccgctgatcgaatacgacagcctgaccggccgcatctcccgg
cggggaagcagcgccatggccgcgctgaccggcgcgggcacgattccgcagagttccggc
tacccggtccaccatgcggagacccgcgtccgcctcggcgagctggacgaagagtatatc
gaggagagccgggtcggcgacgtcttccagctgggcaccagctcgtggcgtatccagagc
atccggcaggaccgggtctatgcggtggaagcgggcaaccggtacagcgaaatcccgttc
tggcggaacgagggccccgggcgttcctacgagctgggacaggccgtcggccggctgtgg
gccgaacttgaacggcggctgacggctggcggtggagcggcggggagcgctgtcgaaacg
gcggaacatgtcgatggagcggcagcgcgtgaagccgtcaacccttcggagggtcaggcg
gcggacttcggggggccggataatggttccgggacgggcggccaggcggccgccgatgcg
gagaccatcgactggctgtcccgcagcttccatctggacggcggggcggcatccggcctt
gcggcgctcgtccgctcccagcacgcgcacggcggcgtgccgaccgacaagcggctgctc
gtcgagtattaccgcgacgtgacggggcgctggcacgtcgtcatgcacaaccactggggc
aagcgcgtcaaccgcacctggctgctggcgatccggcatgtgctggaacaagcgatgggg
cagcaggtgtacgcccatgcccgggacggcggaatcgagcttgtgctgccggaatgggga
ccggcctggcttgacgccgtgcggcaagtgacgcccgacaatgtggagcggctgctgagg
gaagccattgccggctcccccctcttcgccgtctcgttccggcgcattgcggagacgtcg
ctgctcttgcagcgcagcttccggcgcacgccgatgtggcagaaacgcatccgcagcgaa
gaactgctccgggaggcgctgccgtatgccgagcagttcccctatctgcacgaagcgatg
cgctgcacgcttcacgacgagctggacctcccgaaccttctggatgcgctgcgctccctc
gccgacggcaccatccgcatcgtcatgcgcgagaccgcgcatccttcgccgctggcgtcg
gcattcgtgtccgattacgcgatgaagcaattgtacgaaggcgaccagctcagcggcgat
ttgcagttgcagctcatcgaaatcaacaagcggcttgcgggcgaactgttcggcgaggaa
gcgctgcgccgcgccgtgcggccggaagcgatcgaggaagagcggcggcggctcgccgaa
ccggggccgggcggtccgcccgcggatccggacgggctgtacgcgctgctcaagcggcgg
ggcgacagctcggccgacgagctggccgcttgggccggcggccggacggcggagtggctc
cgggcgctcgaacgggatggccggattgcgccgctggaattcggcggcattgtgcgctgg
atctgcgcggacgaacgcgacctgtaccgcgagtttcccgcgactcccgcatccgtcgcc
ttcgtggccgggcgctggacggagcaggtgctctccttcacgatggcggatctgatcggc
cgctatccgcagctgtcgccggtgcaggcgcgcgccgtcatcgacgagctgctgctgcag
gagcggatcgaaccgtcgccgatcgcgggcgatgatgaaggcgaggcatggatgagcagc
cggatcgcctcccgcatcctccgccgttccgtgcgggaagcgcgcagggaggccgagccg
ctcgagccggaaaggtggctgctggaggctgccgcgctccagtacgcgctgccgggcgcg
cggctcgccggcgagagcggcctgctggcggtgatcggccggctgcaggggctgttcctg
ccgctcgaactgtgggagaccgtcatcttcccctcccggctgaccgcttaccgcggcgaa
ctgctcgacgcgctctgcgcaagcggggaagtcatctggacggcgcgcagggaatccggc
gccgaccaggtccaggtcgcgttcttccttgccgaatcacgggaactctacgttccggtt
ctgcgggaaagcgccggccggccggtcaagcacccggaactgctcgatcggctccgggat
ggcggcgccgccttcctgacgaagctggcccgggagttcgaccggctgccgtccgagctg
ctgtccgatctgctggatctcgtccgggacgggcatgtgtcgaacgatcaattcgccccg
ctgcgtctcgcattgacggcgaagccggcaaaaacggcgaagaccgcgcagacaggcgct
gcccgcggactgccccggaccggctccggacacggccgctggtatgcgctctccgatctg
ctgcaggatgcggatgcgccgcaagccgatgtgccgcaagagacgtccgtcatggcctgg
acgcgccatctgctcgacgggttcggcgtgctcgcgaaagaaacggccgaccactggtcg
cccttcgggtgggatgtgctgctgcccgttctccggcagttggagaccatgggcatcgtc
acgcgcggcctgttcgtccgcggcgtgcagacgatgcaattcgtctcccgtgaacgggtc
gcttcgcttcgccgtccgcccgtcgaagccggggccgaagacgacgtgacggtgctggcc
gcgtccgatcccgcaagtccgttcgggctgcttgcgccgtggccgcagcggccgggcgcc
gccttcgcgcgccgcagcggcaacttcctcgtgctgcgcggcggggaatggctgctgtgg
atcgaaggatacgggaggagcgtatccacgatgcgggcgccggaagacatcggcgaagat
gcgctggcggacacgatgcgccgcgcgttccgcacgatcatgcaaatgacgaagcgcagc
aaaatccggatcgcctccctgaacggcgaaccggccgccgaatcgccggaggccgcctcc
ttgctgcaatccgtcggagcggagcgcgacgcccgcgcgatgacggtctggctgagctcg
ctcggccgatga

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