Thermaerobacter composti: Q5761_01600
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Entry
Q5761_01600 CDS
T09555
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
tcp
Thermaerobacter composti
Pathway
tcp00470
D-Amino acid metabolism
tcp00550
Peptidoglycan biosynthesis
tcp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tcp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Q5761_01600 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Q5761_01600 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tcp01011
]
Q5761_01600 (murD)
Enzymes [BR:
tcp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Q5761_01600 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
tcp01011
]
Precursor biosynthesis
Amino acid ligase
Q5761_01600 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
XdhC_C
2-Hacid_dh_C
KH_DEAH11
Motif
Other DBs
NCBI-ProteinID:
WPD19393
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Position
388742..390412
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AA seq
556 aa
AA seq
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MGEPGVEKVGAAGGSGTNRPVPARSPSRAEGPAEEPVGGPRPRLGPGAAPGSGPRGTVGP
AGGAFPASGIVPTAGGEAIVPGPVAVVGLGRSNRALVRYLRAHGVAVVGCDRQPPEQADP
EIRALGEAGVELHLGPDYLRVLVERPFATVFLTPGMKKDLPEIRAARAAGARIRGEVDLF
LERCRATVIGVTGSAGKTTTTSLIGEGLRQAATPGGPLEDRPVYVGGNIGRPLIEEVDRI
PPEALVVLELSSFQLELCHRAPHVAVYLNLRPNHLDVHGSMEAYAAAKARIVELQQPDGW
AVLNGDDPAPAELAPRAPGHVAVFAASARVARQLAEREASRRGGPVRAGYLDGHHLVFWD
GREERRLLDGRAMRLRGAHNRLNALAAILAGWVAGAPPEAMAQAAAAFPGVEHRLELVRE
LDGVRYYNDSIATAPDRTLAALESFSEPVVLIAGGYDKGIPFDPLGPAVCRRARAVVLLG
QTADAIQRGIEAAAAREGRGPVVRRVGSLDEAVREARRLARPGDVVLLSPACASYDMFRD
YAERGRRFKELVRALV
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
gtgggggagccgggcgtggagaaggtgggagcggcaggcggatccgggacgaaccggccg
gtccccgcgcggtcgccgtcccgggccgaggggccggcggaggaaccggtcggcggtccg
cggccgcggctcgggcccggcgcggcccctggctctgggccgcgggggacggtgggcccg
gccggaggggccttcccggcgtcggggatcgtccccaccgccgggggcgaggccatcgtc
cccgggcccgtggcggtggtggggctcggtcgcagcaaccgcgccctggtgcggtatctt
cgggcccacggcgtggcggtcgtgggctgcgaccgccagccgcccgagcaggccgatccc
gagatccgcgccctcggggaggcaggggtcgaactccacctgggcccggactacctgcgg
gtcctggtggagcgtcccttcgccaccgtgttcctcacccccggcatgaagaaggatctg
cccgagatccgggccgcccgggcggcaggggcccggatccgcggggaggtggacctgttc
ctcgagcgctgccgggcgacggtgatcggcgtcaccggcagcgccgggaagaccaccacc
acctccctgatcggcgaggggctgcggcaggcggcgaccccgggcggccccctcgaggac
cgtcccgtctacgtcggcggcaacatcggccgtccgctgatcgaagaggtggaccgcatc
ccgcccgaggccctggtggtcctcgagctctccagcttccagctggagctctgccaccgg
gcgccccacgtggcggtgtacctcaacctgcggcccaatcacctggacgtccacggcagc
atggaggcctacgccgccgcgaaggcccgcatcgtggagctgcagcagcccgacggctgg
gcggtgttgaacggggacgacccggcccccgccgaactggcaccgcgggcgccgggccac
gtggcggtcttcgccgcctcggcccgggtggcgcggcagctggcggagcgggaggccagt
cggcggggcgggccggtgcgggccggctacctggacggccatcacctggtgttctgggac
ggacgggaagaacgccgcctgctggacgggcgcgccatgcggctgcgcggcgcccacaac
cgcctgaacgcgctggcggccatcctcgcggggtgggtggcgggcgccccgcccgaggcc
atggcgcaggcggccgcggccttccccggggtggagcaccgcctggagctggtgcgggaa
ctcgacggcgtgcggtactacaacgactccatcgccaccgccccggaccgcaccctggcc
gccctggagtccttcagcgagcccgtggtgctgatcgccggcggctacgacaagggcatc
cccttcgaccccctggggccggcggtgtgccgccgggcccgggccgtggtcctgctgggc
cagacggccgacgccatccagcgggggatcgaggcggcggctgcgcgcgagggcaggggg
ccggtggtacggcgggtcgggtcgctggacgaggcggtgcgggaggcgcggcggctggcg
cgacccggtgacgtggtgctgctctccccggcctgcgccagctacgacatgttccgcgac
tacgccgagcgcgggcggcggttcaaggagctggtccgggccctcgtctag
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