KEGG   Thermaerobacter composti: Q5761_01950
Entry
Q5761_01950       CDS       T09555                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
tcp  Thermaerobacter composti
Pathway
tcp03030  DNA replication
tcp03410  Base excision repair
tcp03420  Nucleotide excision repair
tcp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tcp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Q5761_01950 (polA)
   03410 Base excision repair
    Q5761_01950 (polA)
   03420 Nucleotide excision repair
    Q5761_01950 (polA)
   03440 Homologous recombination
    Q5761_01950 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tcp03032]
    Q5761_01950 (polA)
   03400 DNA repair and recombination proteins [BR:tcp03400]
    Q5761_01950 (polA)
Enzymes [BR:tcp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Q5761_01950 (polA)
DNA replication proteins [BR:tcp03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Q5761_01950 (polA)
DNA repair and recombination proteins [BR:tcp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     Q5761_01950 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Q5761_01950 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc HHH_5
Other DBs
NCBI-ProteinID: WPD19455
LinkDB
Position
471826..475215
AA seq 1129 aa
MDADRQQQVAGSPGATWSGGTWPRPVAGGSKTPPAGQEGSTAGGRRGGTGRSQGRGSGVP
SRPQDLLAPDPEHLEDKLVLIDGHSLMYRAFFALPPLATADGLPTNAVYGFLTMLLRLLE
EERPRYLAVAFDRGLPTFRVERYPDYKGHRPETPDDLRSQFPILKDVLAAMGVPMVEHDG
FEADDLLGTLARRARAAGVPRVLLVTGDRDVLQLLDEGIEVLLTRRGISDVQRYDRRRIR
QEMGIEPAQYLDVKALMGDASDNIPGVPGIGEKTALKLIQRLGDLESVLANPEEAGGKKL
PAALREYADQARMSRELARIRTDAPVDFDPERWIRRPADPGVLRPLLMRLEFRSLVERLG
LTAPAAGGIQGAPRHQAGGPPSGAPRDGDRAGPSGARADADPRRAGDDGATGGRGATDEP
ASARGPEAGTPTGLAGADGLAPGTADAGAGWPGAVEELTAEAVASWLDAAAGADAGAAPE
DADPATEPVSPAVGQRFAVAVVASWEGEGDEPRGGAGAVLAGLGLAAGGRVAAWTAGSTA
GGGAGAQPGAAGRTPPPGAGAGSADDPSPAAAGVRGDAGGAGTAGPGVQAVLRALRGRPL
AGFDLKPLYRLLLRQATGERAPAPSGAARGDGAGSASGQALLPPPVADLKLAAYLLDPVR
NRYHLVDTARQFFGWDLEEGPADRPADPACRTVALLGRDAALCARLRPAVEAEIAARGLE
RVYREIELPLVPVLAAMEEAGIAVDRRQLEELGRLFTRRSQELAEQIYELAGERFNINST
QQLGQILFERLGLPVVKKTKTGFSTDAEVLETLAAKHPIAELVLEYRSLVKLQGTYVDGL
AEHIGPDGRIHTTFQQTVAATGRLSSTQPNLQNIPIRDEPGRSLRRAFVAPPGHRLVAAD
YSQIELRVLAHYSGDPGLLEAFARGQDVHARTASEIFGVPLERVTPEQRRVAKAVNFGLA
YGQTDFGLARALRIDRADARRFIDRYFERYPGVKRYMEETVRRARQEGEVSTLLGRRRPV
PEIRHRVYHIRQNAERVAINTPIQGTAADIMKLAMIRVYRALAEEGLRARIVLQVHDELL
LEAPEDEVPAVAALLRREMEGAFTLAVPLVVEVKAGANWYEMEAVDAGA
NT seq 3390 nt   +upstreamnt  +downstreamnt
atggacgccgatcgccagcaacaggtagccgggtcgccgggcgcgacttggtcaggagga
acctggccccggccggtggccggggggtcgaagaccccgccggcggggcaggagggcagt
acggccggcgggcgtcggggagggacggggcgctcccagggacggggtagcggtgtccca
tcccgcccccaggacctgctggcgcccgacccggagcatctcgaagacaaactggtcctg
atcgacggccacagcctgatgtaccgggccttcttcgccctgccacccctggccacggcc
gacggcctgccgaccaacgcggtgtacggcttcctcaccatgctgctgcgcctgctggag
gaggagcgaccccgctacctggccgtcgccttcgaccgcggcctgccgaccttccgcgtg
gagcggtaccccgactacaagggacaccgcccggagacgccggacgacctgcggagccag
ttcccgatcctcaaggacgtgctggccgccatgggcgtccccatggtggagcacgacggc
ttcgaggccgacgacctgctgggcaccctggcccgtcgggcccgggcggccggggtaccc
agggtgttgctggtcaccggcgaccgggacgtgctgcagctgctggacgagggcatcgag
gtgctgctgacccggcgggggatcagcgacgtccagcgctacgaccgccggcgcatccgc
caggagatggggatcgagcccgcccagtacctggacgtcaaggcgctgatgggcgacgcc
tcggacaacatccccggagtgccggggatcggcgagaagacggcgctcaagctgatccag
cgcctgggcgacctggagtccgtgctggccaaccccgaggaggcgggcggcaagaagctg
ccggccgccctgcgcgaatacgccgatcaggcgcgcatgagccgggagctggcccgcatc
cgcaccgacgccccggtggacttcgaccccgagcgctggatccgccggccggccgatccc
ggcgtgctgcgcccgctgctcatgcggctggagttccgcagcctggtggagcggctgggg
ctgacggcgccggcggccggcggaatccagggcgccccgcgccaccaggccgggggaccg
cccagcggggcaccccgggacggggatcgggccggcccgtccggggccagggccgatgcg
gacccgcgccgtgcaggcgacgacggggcgacgggcggacggggtgcgacggacgaaccg
gcttccgcccgcggccccgaggcggggacgcccaccgggctcgccggagccgacgggctc
gcccccggcaccgcggacgcgggcgccggctggccgggcgcggtggaggagctgaccgcg
gaggcggtggcgtcctggctggacgcggcggcgggggccgatgccggcgcggcgcccgag
gacgccgacccggcgaccgagccggtttcgccggcggtggggcagcggttcgccgtcgcc
gtcgtggcgtcgtgggagggggagggggacgagccccggggtggagccggggccgtcctg
gccggcctcggcctggcggcgggggggcgggtcgcggcgtggacggctgggtccaccgca
ggcggtggcgcgggcgcccagcccggtgcggcgggccggacccccccgccgggggccggc
gccggctccgcggacgatccctcccccgcggcggcaggcgtccgcggcgacgcgggaggg
gccgggaccgccggtcccggcgtgcaggcggtgctgcgcgccctgcgcggccggccgctg
gccgggttcgacctcaagccgctgtaccggcttctgctgcgccaggcgaccggggagcga
gcgcccgcgccctcgggagcggccaggggcgacggcgcgggatcggcctcgggccaggcg
ctcctgccgccgccggtggccgacctcaagctggctgcgtacctgctcgaccccgtgcgc
aaccgctaccacctggtggataccgcccggcagttcttcggctgggacctggaggagggg
cccgccgaccgtcccgccgacccggcctgccgcaccgtggcgctcttggggcgcgacgcc
gccctctgcgcccggctgcgccccgcggtggaggcggagatcgccgcccgcggcctggag
cgggtgtatcgggagatcgagctgccgctggtgccggtgttggccgccatggaggaggcc
ggcatcgcggtggaccgccgccagctggaggagctgggccggctcttcacccggcgcagc
caggagctggccgagcagatctacgagctggcgggcgagcgcttcaacatcaactccacc
cagcagctggggcagatcctgttcgaacgcctgggcctgccggtggtgaagaagaccaag
accggcttctccaccgacgccgaggtgctcgagaccctggcggccaagcaccccatcgcc
gagctggtgctggagtaccggtccctggtcaagctgcagggcacctacgtggacgggctg
gcggagcacatcggccccgacggtcgcatccacaccaccttccagcagacggtggcggcg
acgggccggctctccagcacccagcccaatctgcagaacatcccgatccgggacgaaccc
ggccgctccctgcggcgcgccttcgtggcgccgccgggccaccgcctggtggcggccgac
tactcgcagatcgagctgcgggtgctggcccactacagcggcgaccccgggctgctggag
gccttcgcccgcgggcaggacgtccacgcccgcacggccagcgagatcttcggcgtaccc
ctggagcgggtcacgcccgagcagcggcgggtggccaaggcggtgaacttcggcctggcc
tacgggcagacggacttcggcctggcccgcgccctgcgcatcgaccgggccgacgcccgg
cgcttcatcgatcgctacttcgagcgctaccccggggtcaagcgctacatggaggagacc
gtccgacgcgcccgccaggagggcgaggtgagcaccctgctgggccggcgccgaccggtg
ccggagatccgccaccgcgtctaccacatccgccagaacgccgagcgggtggcgatcaac
acgccgatccaggggaccgccgccgacatcatgaagctggcgatgatccgggtgtaccgg
gcgctggccgaggaggggctgcgggcacggatcgtcctgcaggtccacgacgagctcctg
ctcgaggcgccggaggacgaggtgcccgccgtggccgccctgctgcggcgggagatggag
ggtgccttcaccctggcggtgccgctggtggtggaggtcaaggccggcgccaactggtac
gagatggaggccgtcgacgccggtgcctga

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