Thermaerobacter composti: Q5761_03800
Help
Entry
Q5761_03800 CDS
T09555
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
tcp
Thermaerobacter composti
Brite
KEGG Orthology (KO) [BR:
tcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcp03400
]
Q5761_03800
Enzymes [BR:
tcp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Q5761_03800
DNA repair and recombination proteins [BR:
tcp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Q5761_03800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
DUF6894
Motif
Other DBs
NCBI-ProteinID:
WPD19792
LinkDB
All DBs
Position
964103..967924
Genome browser
AA seq
1273 aa
AA seq
DB search
MSLRLILGRAGAGKTHHCLEAVAREEAARPAGPPLILLVPEQATFQMEQALLAAVHRHGR
RGFARARVASFQRLAWWVQQEAGGAATPTVTELGKRLILRALVAREAPRLALFGQVADRP
GFIERLVATLGELAAYGIDADALRARHAALVGEGREGLLAVKLHDLALILEAYQDFLAEH
HLHDPVQVLERVARCIHDAAWLQGARVWVDGFTGFTPGELRVLEALLRVADRVEVSLCLD
PQEAPWAVGGAGQVGRGDDESALFHPTAVTARQLLDIARRAGVAVAPARVLPEAGGGMPR
FRNPALAHLERELFQFPGRRFAGPPEGITLVAAPDRRAEVAAAAREMLRLAREEGYRFRD
MVVIVRDLETYHDLLATACAEHGIPLFVDRRRPVAHHPLLELVRAALEVVAGDWPYEAVF
RYLKTDLVPVPRGEVDRLENYVLAFGIRGSRWYRGGPWRWWRHEALEADVEPTPVQQAEL
EAINRIRDEATGHLRRFFQRVAPARRQPVPAADLAAALYQLLVDLDVPARLQGWSEEAEG
AGDLEAAQEHLQVWNGVAELLEQVGASLPGIALTAAEFLRVLEAGMEGLRVGLIPPGLDQ
VVAGSVERSRHPSARAAFVLGATDDAFPRRVEEDAIFTDQERDELAERGVELGPPGRVRA
LHEQYHTYVALTRARDRLWVSYPLGDEEGRAVAPAWLTRRLRVLLPGLAVSSATADGTDD
VATPAQGIDRLARLLARHRDAMGVSAGPWAPPAPRRGDPPPTWAVLYQWAVTDPAVRPRA
LRSLAALAHANRPRPLGRELGRQLYARPAAAGWLLRTSVSRLERFAACPFQHFAAHGLGL
RERVVGRLDAPRLGRIHHAALSLLARKVWEEGLDWKDLDDSRLEAMVAACLDEIGPRLAQ
ELAVETAYHAHLLERTRRILGQTARRLAEHARRGDFRPLAVEVDFGPDPDAPLQVEPWRL
PSGERLALQGRIDRIDGARTASGRWLVRVVDYKSSAHDLPLDQVYHGLALQLPLYLLVAV
RAGAALGIDPGGAPGRPGAGSPVPAPDGGPPGSPVPAAAVEPAALLYFPVHDPFLDTEGP
LPAEEAARRRARRLLRAQGWVVDDAEVIRAHDRELKPETLIPVELRRDGTPTAWARVLQP
GEMADLFRLVEARVQAMATAILAGRVEVAPYRLKERSPCGTCAFRALCQFDPRLPGNRYR
VMRPLRPQEVWQRVRQAHAPDGGGGASTGLSAGRAAPRPPDRPAPADADGSHGGGPAGPV
PAAAEGGADDDRR
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
gtgagcctgcggctgattctcggccgggcgggggccggcaagacccatcactgcctggag
gcggtggcgcgggaggaggcggcccgtccggccggaccgcccctgatcctcctggtgccc
gagcaggccacgttccagatggagcaggcgctgctggccgcggtccatcgccatggccgg
cgggggttcgcccgggcgcgggtggcgagcttccagcggttggcctggtgggtgcagcag
gaggccggcggggcggcgacgcccaccgtcaccgaactgggcaagcggctgatcctgcgc
gcgctggtcgcccgcgaggccccgcggctcgccttgttcggccaggtggctgaccggccc
ggcttcatcgagcgactggtcgccaccctcggcgagctggcggcctacgggatcgacgcc
gacgccctgcgggcccgccatgcggccctggtgggcgagggccgcgagggcctcctcgcc
gtcaagctgcacgatctcgccctgatcctggaggcgtaccaagactttctggccgaacac
cacctgcacgaccccgtccaggtgctggagcgggtggcgcggtgcatccacgacgccgcc
tggctgcagggggcccgcgtctgggtcgacggcttcaccgggttcacccccggcgagctg
cgggtcctggaggccctcctgcgggtggcggaccgcgtcgaggtcagtctctgcctggac
cctcaggaggcgccctgggccgtgggcggcgccggtcaggtgggacgaggggacgacgag
tcggcgctcttccaccccacggcggtgacggcgcggcagttgctggacatcgcgcggcgg
gcgggggtggccgtcgcccccgcccgggtcctcccggaagcgggcgggggcatgccgcgc
ttccgcaacccagccctggcccacctggagcgggagctgttccagttccctggccgccgc
ttcgccggtccgcccgagggcatcacgctggtggccgcgcccgaccggcgggcggaggtg
gccgcggccgcgcgggagatgctgcgcctggcccgggaagagggataccggttccgggac
atggtggtcatcgtgcgggatctggagacctaccacgacctcttggcgaccgcctgcgcg
gaacacggcatccccctcttcgtcgaccgccgtcgcccggtggcccaccaccccctgctg
gagctggtgcgggcggcgctggaggtggtggcgggcgactggccctacgaggcggtcttc
cgctacctcaagaccgacctggtgcccgtgccgcggggggaagtggaccggctggagaac
tacgtgctggccttcggcatccggggctcgcggtggtatcgagggggcccgtggcgctgg
tggcgccacgaggccctggaggcggacgtcgagccgacgccggtgcagcaggcggagctc
gaggccatcaaccgcatccgcgacgaggccaccgggcacctgcgccggttcttccagcgg
gtggcgccggcccgccggcaaccggtgccggcggcggacctggcggcggccctgtaccag
ctgctggtcgacctcgacgtccccgcccggctccaggggtggagcgaggaggccgagggg
gccggcgacctcgaggcggcccaggagcacctccaggtctggaacggcgtcgccgagctg
ctggagcaggtgggagccagcctgcccgggatcgccctgacggcggccgagttcctgcgc
gtgctggaggcgggcatggagggcctgcgggtcggcctcatcccgccgggcctcgaccag
gtggtggcgggcagcgtggagcgctcgcggcaccccagcgcccgggccgcgttcgtcctg
ggcgccaccgacgacgccttcccccgccgcgtcgaggaggatgccatcttcaccgatcag
gagcgggacgaactggccgagcgcggcgtcgagctggggccgcccgggcgggtgcgggcg
ctgcacgagcagtaccacacctatgtggcgctgacccgggcgcgggaccgcctctgggtg
agctacccgctgggcgacgaggagggccgggcggtggcgccggcctggctcacgcggcgg
cttcgggtcctcctgcccggcctcgccgtgagttccgcgacggccgacgggacggacgac
gtggcgacgccggcgcagggcatcgaccggctggcccggctgctggcccgccaccgggat
gcaatgggggtctccgcggggccatgggctccgcccgccccgcgccgcggggacccgcct
cccacctgggcggtgctctatcagtgggccgtcaccgaccccgccgtccggccccgggcc
ttgcgctcgctggccgccctggcccatgccaaccggcctcgtcccctgggccgcgagctg
gggcggcagctctatgcccgcccggccgcggccggatggctgctgcggaccagcgtcagc
cggctggagcggttcgccgcctgtccgttccagcacttcgcggcccatgggctcgggctg
cgggagcgcgtggtcgggcggctcgacgcgccgcgcctgggccggatccaccatgccgcc
ctcagcctcctggcgcggaaggtgtgggaggagggactggactggaaggaccttgatgat
tcccggctcgaggcgatggtcgccgcgtgcctggacgagatcggcccccggctggcccag
gagctggccgtggagacggcgtaccacgcgcacctgctggagcggacgcggcgcatcctc
ggccagaccgcccgtcgcctggcggagcacgcccgtcgcggcgacttccggccgctggcg
gtggaggtggacttcgggcccgatcccgacgcgccgctgcaggtcgagccgtggcggctg
ccctcgggcgagcgcctggccctgcaaggccggatcgaccggatcgacggggcccggacc
gcgtcgggccgctggctcgtccgcgtcgtcgactacaagagcagcgcccacgacctgccg
ctggaccaggtctaccatgggctggccttgcaactgccgctgtacctgctggtggccgtc
cgggcgggcgccgccttggggatcgaccccgggggggcgcccgggcggccgggagccgga
tcgccggtcccggccccggacggcggcccgcccgggagcccggtcccggcggccgcggtg
gagccggcggcgctgctgtacttcccggtccacgacccgttcctcgacaccgagggtccg
ttgccggcggaggaggccgcccggcggcgggcgcgccggctcctgcgggcccagggctgg
gtggtcgacgacgcggaggtcatccgggcccatgaccgcgagctcaagcccgagaccctg
atcccggtggagctcaggagggatgggacgcccacggcctgggcgcgggtcctccagccg
ggggagatggcggatctcttccggctggtggaggcgcgggtccaggcgatggcgacggcc
atcctggcggggcgggtggaggtggcgccgtaccgcctcaaggaacgctcgccctgcggc
acctgcgccttccgcgcgctctgccagttcgacccgcgcctgccgggcaaccgctaccgg
gtgatgcggcccctgcgtccccaagaggtctggcagcgggtgcggcaggcccacgccccg
gacggcggcggtggggcgtcgaccggcctgtcggccggccgggcggccccgcggccgccg
gaccggcccgccccggcggacgccgacggatcccacgggggcggacccgccgggcccgtc
cccgctgccgcggagggaggggcggacgatgaccgtcggtga
DBGET
integrated database retrieval system
