Thermaerobacter composti: Q5761_04180
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Entry
Q5761_04180 CDS
T09555
Symbol
sigI
Name
(GenBank) RNA polymerase sigma factor SigI
KO
K03093
RNA polymerase sigma-I factor
Organism
tcp
Thermaerobacter composti
Brite
KEGG Orthology (KO) [BR:
tcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcp03021
]
Q5761_04180 (sigI)
Transcription machinery [BR:
tcp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Q5761_04180 (sigI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_ECF
HTH_16
Motif
Other DBs
NCBI-ProteinID:
WPD19857
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All DBs
Position
1064065..1064787
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AA seq
240 aa
AA seq
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MGASPLGTDQLIVAAKAGDDDARNELIRAYTPFVLKVASRVCGRYLHPGQDEEISIGLLA
FNEAIDRFDARRGNNFIAFAETVIKRRLIDHFRKQTATRVAVPFSDLETEDEDGHPVNQV
DIQAALDRHALAEEAWERRQEILRLQQELAQFGIRFSDLVESCPKHKDARDRAIQVARRL
ATVPAYREALLKNRTLPLRELAADPLVQASRKTLERQRKYIVAVALILMGDYVYLQEYVA
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccagccccctggggacggaccagctgatcgtcgcggccaaggcgggggacgac
gacgcccgcaacgagctgatccgggcgtacactcccttcgtcctcaaggtggcgtcccgc
gtctgcggccgctacctgcaccccggccaggacgaggagatcagcatcgggctcctggcc
ttcaacgaggccatcgatcgcttcgacgcccgccggggcaacaacttcatcgccttcgcc
gagacggtgatcaagcgccggctcatcgatcacttccgcaagcagaccgcgacccgggtg
gcggtccccttcagcgatctggagacggaggacgaggacggccatcccgtcaaccaggtg
gacatccaggcggccctggaccgccatgccctggcggaggaggcctgggagcggcgtcag
gagatcctgcggctgcagcaggagctggcccagttcggcatccggttcagcgacctcgtg
gagagctgtccgaagcacaaggacgcccgcgaccgggcgatccaggtcgcccggcgcctg
gccacggttcccgcctaccgggaagccctcctcaagaaccgcaccctgcccctgcgggag
ctggcggccgaccccctggtgcaggcctcccgcaagaccctggagcgacagcgcaagtac
atcgtggccgttgccctgatcctcatgggcgactatgtatacctgcaggagtacgtggca
tga
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