Thermaerobacter composti: Q5761_05245
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Entry
Q5761_05245 CDS
T09555
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
tcp
Thermaerobacter composti
Pathway
tcp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tcp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q5761_05245 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcp03019
]
Q5761_05245 (rny)
Messenger RNA biogenesis [BR:
tcp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Q5761_05245 (rny)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
DUF5662
Propep_M14
KH_2
DUF7669
Colicin_V
DUF6187
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
WPD20046
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Position
1326098..1327645
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AA seq
515 aa
AA seq
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MVVPTGVFVLILLATLVIAGLAGYLVRKVVAESRIGSAEALARQLIEEGRKEGEARKREA
LLEAKEEVHRLRTDFERESRERRQELQQLERRLLQREEALERRARQLDEREELMRARERD
LDRAEELVEELRLRQMTELERTAGMSRDEARELLMSQVREEMRHDLAVMIRQMEEEARAE
ADRRAREIIANAVQRLAAEYVPELTVSVVELPGDEMKGRIIGREGRNIRHFEALTGVDLI
IDDTPEAVVISCFDPIRREIARMTLEKLIADGRIHPAKIEEMYAKAVEEMEERIRQEGER
ACYEVGVHNLHPELVKLLGRLAFRTSYGQNILQHSIEVAHLCALMAYELGADVNVARRAG
LLHDIGKALDHEMEGTHLTIGMEILQKYHESEEVIHAMSCHHGDFEAKTIEAVIVTAADA
LSAARPGARRETLEAYIRRLRQLEEIASSFPGVAKAYAIQAGREVRIMVHPDQVDDAEAY
LLARQIAKRIERELQYPGQIKVTLIRETRVTEYAR
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggtcgttccgacaggcgtcttcgtcctcatcctcctcgcgaccctcgtgatcgccggg
ctggccggctacctggtccgcaaggtggtggcggagagccgcatcggctccgccgaggcc
ctggcccgacagctgatcgaagagggccggaaggagggcgaggcgcgcaagcgcgaggcc
ctgctggaggcgaaggaagaggtccacaggctgcgcacggacttcgaacgggagagccgg
gagcggcggcaagagctgcagcaactggagcggcgcctgctgcaacgggaggaggcgctg
gaacgacgggcgcgccagctggacgagcgggaggagctgatgcgggcccgtgagcgcgac
ctggaccgggccgaagagctggtggaggagctgcgcctgcggcagatgacggagctggag
cgcaccgccggcatgagccgcgacgaggcgcgggagctgctcatgagccaggtccgggag
gagatgcgccacgacctggcggtgatgatccggcagatggaggaggaggcccgcgccgag
gcggaccgccgggcgcgggagatcatcgccaacgcggtccagcgcctggcggcggagtac
gtccccgagctcaccgtgtcggtggtcgagctgcccggggacgagatgaagggccgcatc
atcggccgcgaggggcgcaacatccggcacttcgaggccctgacgggggtcgacctgatc
atcgacgacacgccggaggcggtggtgatctcctgcttcgacccgatccgccgggagatc
gcccgcatgacgctggagaagctgatcgccgacgggcgcatccacccggcgaagatcgag
gagatgtacgccaaggccgtggaggagatggaggagcgcatccgccaggagggcgagcgc
gcctgctacgaggtgggcgtgcacaacctgcacccggagctggtcaagctgctgggccgg
ttggccttccggaccagctacggccagaacatcctccagcactccatcgaggtggcccac
ctctgcgccctgatggcgtacgagctgggcgccgacgtcaacgtggcgcggcgcgccggg
ctcctgcacgacatcggcaaggcgctggaccacgagatggagggcacccacctcaccatt
ggcatggagatcctgcagaagtatcatgagtcggaagaggtcatccatgccatgtcctgc
caccacggggacttcgaggcgaagaccatcgaggcggtcatcgtcaccgccgccgacgcg
ctgtcggcggcgcgacccggggcgcggcgcgagaccctggaggcgtacatccgccggctg
cgccagctggaggagatcgcctccagcttccccggggtggcgaaggcctacgccatccag
gcggggcgcgaggtgcgcatcatggtccaccccgaccaggtggacgacgccgaggcgtac
ctcctggcgcggcagatcgccaagcgcatcgagcgggagctccagtacccgggccagatc
aaggtgacgctgatccgggagacgagggtgaccgagtacgcgcggtag
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