KEGG   Thermaerobacter composti: Q5761_05245
Entry
Q5761_05245       CDS       T09555                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
tcp  Thermaerobacter composti
Pathway
tcp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tcp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Q5761_05245 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tcp03019]
    Q5761_05245 (rny)
Messenger RNA biogenesis [BR:tcp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Q5761_05245 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD DUF5662 Propep_M14 KH_2 DUF7669 Colicin_V DUF6187 KH-I_KHDC4-BBP
Other DBs
NCBI-ProteinID: WPD20046
LinkDB
Position
1326098..1327645
AA seq 515 aa
MVVPTGVFVLILLATLVIAGLAGYLVRKVVAESRIGSAEALARQLIEEGRKEGEARKREA
LLEAKEEVHRLRTDFERESRERRQELQQLERRLLQREEALERRARQLDEREELMRARERD
LDRAEELVEELRLRQMTELERTAGMSRDEARELLMSQVREEMRHDLAVMIRQMEEEARAE
ADRRAREIIANAVQRLAAEYVPELTVSVVELPGDEMKGRIIGREGRNIRHFEALTGVDLI
IDDTPEAVVISCFDPIRREIARMTLEKLIADGRIHPAKIEEMYAKAVEEMEERIRQEGER
ACYEVGVHNLHPELVKLLGRLAFRTSYGQNILQHSIEVAHLCALMAYELGADVNVARRAG
LLHDIGKALDHEMEGTHLTIGMEILQKYHESEEVIHAMSCHHGDFEAKTIEAVIVTAADA
LSAARPGARRETLEAYIRRLRQLEEIASSFPGVAKAYAIQAGREVRIMVHPDQVDDAEAY
LLARQIAKRIERELQYPGQIKVTLIRETRVTEYAR
NT seq 1548 nt   +upstreamnt  +downstreamnt
atggtcgttccgacaggcgtcttcgtcctcatcctcctcgcgaccctcgtgatcgccggg
ctggccggctacctggtccgcaaggtggtggcggagagccgcatcggctccgccgaggcc
ctggcccgacagctgatcgaagagggccggaaggagggcgaggcgcgcaagcgcgaggcc
ctgctggaggcgaaggaagaggtccacaggctgcgcacggacttcgaacgggagagccgg
gagcggcggcaagagctgcagcaactggagcggcgcctgctgcaacgggaggaggcgctg
gaacgacgggcgcgccagctggacgagcgggaggagctgatgcgggcccgtgagcgcgac
ctggaccgggccgaagagctggtggaggagctgcgcctgcggcagatgacggagctggag
cgcaccgccggcatgagccgcgacgaggcgcgggagctgctcatgagccaggtccgggag
gagatgcgccacgacctggcggtgatgatccggcagatggaggaggaggcccgcgccgag
gcggaccgccgggcgcgggagatcatcgccaacgcggtccagcgcctggcggcggagtac
gtccccgagctcaccgtgtcggtggtcgagctgcccggggacgagatgaagggccgcatc
atcggccgcgaggggcgcaacatccggcacttcgaggccctgacgggggtcgacctgatc
atcgacgacacgccggaggcggtggtgatctcctgcttcgacccgatccgccgggagatc
gcccgcatgacgctggagaagctgatcgccgacgggcgcatccacccggcgaagatcgag
gagatgtacgccaaggccgtggaggagatggaggagcgcatccgccaggagggcgagcgc
gcctgctacgaggtgggcgtgcacaacctgcacccggagctggtcaagctgctgggccgg
ttggccttccggaccagctacggccagaacatcctccagcactccatcgaggtggcccac
ctctgcgccctgatggcgtacgagctgggcgccgacgtcaacgtggcgcggcgcgccggg
ctcctgcacgacatcggcaaggcgctggaccacgagatggagggcacccacctcaccatt
ggcatggagatcctgcagaagtatcatgagtcggaagaggtcatccatgccatgtcctgc
caccacggggacttcgaggcgaagaccatcgaggcggtcatcgtcaccgccgccgacgcg
ctgtcggcggcgcgacccggggcgcggcgcgagaccctggaggcgtacatccgccggctg
cgccagctggaggagatcgcctccagcttccccggggtggcgaaggcctacgccatccag
gcggggcgcgaggtgcgcatcatggtccaccccgaccaggtggacgacgccgaggcgtac
ctcctggcgcggcagatcgccaagcgcatcgagcgggagctccagtacccgggccagatc
aaggtgacgctgatccgggagacgagggtgaccgagtacgcgcggtag

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