Thermaerobacter composti: Q5761_06065
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Entry
Q5761_06065 CDS
T09555
Name
(GenBank) sigma factor-like helix-turn-helix DNA-binding protein
KO
K24072
positive control factor
Organism
tcp
Thermaerobacter composti
Brite
KEGG Orthology (KO) [BR:
tcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcp03021
]
Q5761_06065
Transcription machinery [BR:
tcp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Q5761_06065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
PhyR_sigma-like
GerE
Sigma70_ECF
HTH_23
HTH_17
HTH_29
HTH_28
HTH_Tnp_ISL3
Phage_NinH
Pyr_excise
DUF6237
GntR
Motif
Other DBs
NCBI-ProteinID:
WPD20193
LinkDB
All DBs
Position
complement(1495981..1496448)
Genome browser
AA seq
155 aa
AA seq
DB search
MRPHLQDLIAEYRESLRLARRAWRLAESPGDREVIGGMIRDLQWTITYMETGYPPPERWG
PYPRVVPVDPALLDRVRAVYCEFTDRGLGERAAMRSALWNELNRLSPMEREVFVLVVGEA
FSEREVARMLKLSRRTVRTLLQRARQKLVVDSLAM
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcccacacctgcaggacctcatcgccgagtaccgggagagcctgcgcctggcgcgg
cgagcctggcggctagcggagtcgcccggagaccgtgaggtaatcgggggcatgatccgc
gacctgcagtggaccatcacgtacatggagacgggctacccgcccccggagcgctggggg
ccgtacccgcgggtcgtacccgtcgacccggcgctgctggaccgggtccgggcggtctac
tgcgagttcaccgatcgcggcctgggggagcgggcggccatgcgctcggccctctggaac
gagctcaatcgcttgagccccatggagcgggaggtcttcgtgctcgtggtcggcgaggcg
ttctcggagcgggaagtggcccggatgcttaagctctcgcgacgtaccgttaggacgttg
ctccaacgcgcccgtcagaaactcgtagtcgattcccttgcgatgtag
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integrated database retrieval system
