Thermaerobacter composti: Q5761_06365
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Entry
Q5761_06365 CDS
T09555
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tcp
Thermaerobacter composti
Pathway
tcp03410
Base excision repair
tcp03430
Mismatch repair
tcp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Q5761_06365 (recJ)
03430 Mismatch repair
Q5761_06365 (recJ)
03440 Homologous recombination
Q5761_06365 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcp03400
]
Q5761_06365 (recJ)
DNA repair and recombination proteins [BR:
tcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Q5761_06365 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Q5761_06365 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Q5761_06365 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
HTH_20
Motif
Other DBs
NCBI-ProteinID:
WPD18017
LinkDB
All DBs
Position
complement(1555044..1557323)
Genome browser
AA seq
759 aa
AA seq
DB search
MRPPLLGRRWRVRPASAQAAARLAQALGITPLTARVLAARGFADASQARQLLQGGPPLRD
PFRLPDMEAAVDRIRRALARGEGILVVGDYDADGVAAAALLYRGLRRLEPAARVEVYIPD
RLREGYGVPGGALDVADAVGATLLITVDNGIAAHGPLAEARRRGIDTIVTDHHQVQGDLP
PALAVVNPHRPDSEYPWRGLCGTGVVFKLLQALVGDEPAPSEWWQLAAVATVADVVPLQD
ENRTLVQRGLEELAASPLPGLAALAEAAGLSDTRLDAHGVAFILAPRLNAAGRMGSASQA
FELLATDSRTRARALALAVEQLNRLRRQQEELALGQALARLERGEGLIGGEVIALADPRW
HQGVLGIVASRLVDVFHRPALVGRREGDRITGSGRSIAGFHLFRALEACAELFDRFGGHA
QAAGFTLPAARWGDLGQRLAAEARAHLAPEDRVPLLEVDAVARPDEVTVAAVRELERLAP
FGEGHPEPVIALVDLGPVAARPVGEEGEHLRLEWAGGSAVAFGLGALAERVRRVGRVEVA
VRPRVGTFRGEERVDLHVADVRPAAAQRAAWLAAEVERRRRWTAELYPDRGMLTRVYAAL
ERVAATGGGAAGGRGRGPVGGPVVPGDLAAVVDALARHLPGWPRHTVRAAVEILREAGVL
TPVDASERAWALAPRGRRAFDLNHSPRYRTGMARRRLLDGVAAALAAGRWAEAERGLAHP
LALPLPPSYNEVIRRRSGDAGAGTRPGPAGGTAAGTAGG
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgccgctcctgggccggcggtggcgggtgcgcccggcgtcggcgcaggcggcg
gcccggctggcccaggccctgggcatcacgcccctcacggcgcgggttctggccgcccgg
ggcttcgccgacgcgtcccaggcccggcagctgctccagggcggcccgccgctgcgggac
cccttccggctgccggacatggaggcggcggtggatcgcatccgccgcgccctggcccgc
ggcgagggcatcctcgtcgtcggcgactacgacgccgacggcgtcgcggcggccgccttg
ctgtaccgcggcctgcgacgcctcgagccggcggcccgggtcgaggtctacatccccgac
cggctgcgggagggctatggcgtgcccggcggcgccctggacgtcgcggacgccgtcggt
gccacgctgctgatcaccgtggacaacggcatcgccgcccacggtcccctggcggaggcg
cggcgccggggcatcgacaccatcgtcaccgatcaccaccaggtgcagggcgacctgccg
ccggcgctggcggtggtcaacccccatcgtccggacagcgagtatccctggcggggcctg
tgtggcacaggcgtggtgttcaagctgctccaggcgctggtgggggacgaaccggccccg
tccgaatggtggcagctggccgccgtggccacggtggccgacgtggtgcccctccaggac
gagaaccgcaccctggtccagcggggactggaggaactggccgccagccccctgcccggc
ctggcggcgctggccgaggcggcggggctctccgacacccgcctggacgcccacggcgtg
gccttcatcctggcgccgcggctcaacgccgccggtcgcatgggatcggcgtcccaggcc
ttcgagctgctggccaccgactcgaggacccgcgcccgcgccctggcgctagccgtcgag
cagctgaaccggctgcgccgccagcaggaggagctggccctcggccaggccctggcccgg
ctggagcggggggaggggctgatcggcggcgaggtcatcgccctggccgacccccgctgg
caccagggcgtcctgggcatcgtggcgtcgcggctggtggacgtcttccaccggcctgcg
ctggtgggtcgccgcgagggggatcgcatcaccggttcgggccgcagcatcgccgggttc
cacctgttccgggcgctcgaggcgtgcgccgagctcttcgaccggttcggcggccacgcc
caggcggccggcttcaccctgcccgcggcgcgatggggcgatctcggccagcgactggcg
gcggaggcccgcgcccacctggcgccggaggaccgggtgccgctgctggaggtggacgcc
gtggcgcgcccggacgaggtgaccgtggccgccgtccgcgagctggagcgattggccccc
ttcggcgagggccatcccgagccggtgatcgccctggtggacctcggacccgtggcggcg
cgccccgtgggcgaggagggcgagcacctgcgcctggagtgggcaggcggatccgcggtg
gccttcggactcggtgccctggccgagcgcgtccggcgggtggggcgggtggaggtggcc
gtccgcccgcgggtcggcaccttccgcggggaggaacgggtcgacctacacgtcgccgat
gtgcggccggccgcggcccagcgcgcggcctggctggccgcggaggtggagcgccgccgc
cgttggacggcggagctctacccggatcgcgggatgctgacccgcgtgtacgcggcgctg
gagcgggtggcggcgacaggcggcggtgcggcggggggccgtgggagggggccggtgggc
gggcccgtggtccccggcgacctggcggccgtggtggatgccctggcccgccacctgccg
gggtggccccggcatacggtgcgcgcggcggtggagatcctgcgcgaggcgggcgtgctg
acgcccgtggacgccagcgagcgggcctgggcgctggccccgcggggccggcgcgccttc
gacctcaaccacagcccgcgctaccgcacagggatggcccgccgccgcctgctggacggg
gtggcggcggccctggcggcgggccgctgggccgaggcggagcgcgggctggcccatccc
ctggccttgcccctgccgccgagctacaatgaagtgataagacgccgcagcggagacgcc
ggcgccgggacccggcccggccccgcggggggcaccgccgccggcacggccggcggctga
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