Thermaerobacter composti: Q5761_10675
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Entry
Q5761_10675 CDS
T09555
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
tcp
Thermaerobacter composti
Pathway
tcp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Q5761_10675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcp03400
]
Q5761_10675
Enzymes [BR:
tcp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Q5761_10675
DNA repair and recombination proteins [BR:
tcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Q5761_10675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
DUF6285
Motif
Other DBs
NCBI-ProteinID:
WPD18813
UniProt:
A0ABZ0QR07
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All DBs
Position
complement(2626350..2627303)
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AA seq
317 aa
AA seq
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MIEQGIAGADPQTPSPTAGAASGGAAPTHSPLVVGCHLSVAKGFPTAARVASQVAANALQ
FFPRNPRGGAQRQVDEAERAEWLRQRDAVGLRFVIAHIPYTVNLASPKAQAYAFARRVLQ
EDLERCRWVGADAAVTHPGSYVEGDPADGIRRIVAAIEPVLPLLDEPGAPWLLLETMSGQ
GTEIGGRLEELRAILDGLGWPERVGVCLDTCHLFAAGYDWRDPAAVDRLVDDVDRAVGWG
RVRALHVNDSKFPCGSRRDRHEKVGQGAIGREGFANLLRHPRLRALPMLLETPVDRELEY
ADEIRWLRELDRALGDS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgaacagggcattgccggagcggacccgcagaccccgtcccccacggccggcgcg
gccagcggtggcgccgcacccacccattcgccgctggtggtgggatgccacctctccgtc
gccaagggcttcccgacggcggcgcgggtggcatcccaggtggcggccaacgcgctgcag
ttcttcccgcgcaatccccggggcggggcccaacgccaggtggacgaggcggagcgcgcc
gagtggctgcggcagcgggacgcggtgggcctgcgcttcgtgatcgcccacatcccgtac
acggtcaacctcgcctcgcccaaggcccaggcctatgcgttcgcccgccgcgtcctgcag
gaagacctggagcgctgccgatgggtgggggcggacgccgccgtgacccaccccggcagc
tacgtggagggggatcccgccgacgggatccgtcgcatcgtcgccgccatcgagccggtg
ctccccctgttggacgaacccggcgccccctggctgctgttggagaccatgtcgggtcag
ggcaccgagatcggcggccggctggaggagctccgcgcgatcctggacgggctggggtgg
ccggagcgggttggcgtctgcctggacacctgtcatctcttcgcggccggctacgactgg
cgcgaccccgcagccgtcgatcggctggtggacgacgtggaccgcgcggtggggtggggg
cgggtccgggccctccatgtcaacgacagcaagttcccgtgcggcagccggcgcgaccgc
cacgagaaggtcgggcaaggggccatcgggcgggagggattcgccaacctgctccggcat
ccccgcctgcgagcgctgcccatgttgctggagacgccggtggaccgcgagctggagtac
gccgacgagatccgctggctgcgggagctggaccgggccttgggggacagctga
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