Thermaerobacter composti: Q5761_11340
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Entry
Q5761_11340 CDS
T09555
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
tcp
Thermaerobacter composti
Pathway
tcp03030
DNA replication
tcp03430
Mismatch repair
tcp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q5761_11340 (holA)
03430 Mismatch repair
Q5761_11340 (holA)
03440 Homologous recombination
Q5761_11340 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tcp03032
]
Q5761_11340 (holA)
03400 DNA repair and recombination proteins [BR:
tcp03400
]
Q5761_11340 (holA)
Enzymes [BR:
tcp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q5761_11340 (holA)
DNA replication proteins [BR:
tcp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Q5761_11340 (holA)
DNA repair and recombination proteins [BR:
tcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Q5761_11340 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
B12-binding_2
Motif
Other DBs
NCBI-ProteinID:
WPD18939
LinkDB
All DBs
Position
complement(2792356..2793606)
Genome browser
AA seq
416 aa
AA seq
DB search
MESKPAAAAVEAIRRGSIEPVYLLHGGETYWHDTIVKAVRDALLPPDDLLNFVQVDGRTV
GVEEAVEQARTVPLLAERRLVVVRDAAWLAPRAPGAERGTFHRAEGRGAPRQPATADRRS
PASAASASGTAEGADRSVTSTASGTADAGRRRATGGDGRGAADPEEAALIAYLEDPAATT
VLVICHPGDVDGRRAAVRLLRQRGWAVACEPLRDEALASWLAEQAAAWGKELEPEAVAWL
LESGEPDLQRLAREIAKVATYVGERRRITAADLRAVGVAVATAGVFELIDAILAGRRRQA
MELLGRLLDADEPPLRLLGLIARQYRILAYACGLRAEGGDVHRLQQALRLHPFVARKAWR
QAQAVSPEWALAALEAVLETDVGIKQGRWPARIGLERLVWRLSGAGSTHGVAMPRS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
gtggagtccaagccggctgctgcggccgtggaggcgatccgccgcggaagcatcgaaccg
gtgtacctgctccacgggggcgagacctactggcacgacaccatcgtcaaggccgtgcgc
gacgcgctgctgccccccgatgacctcttgaacttcgtccaggtggacgggcgcacggtg
ggcgtggaggaggcggtggaacaggcgcgcaccgtcccgctgctggcggagcgccggctg
gtcgtggtccgcgacgccgcctggctggcgccccgggcccccggcgccgagagggggacg
ttccatcgcgccgagggtcgcggtgctccgcgccagcccgccaccgccgaccgacggtcc
ccggcttccgccgcctccgcgtccgggaccgcggagggtgccgaccgctccgtgacatcc
acggcctcggggacggcggatgccggccgccggcgcgcgaccggaggcgatggccggggg
gcggccgatccggaggaggcggcgctgatcgcctatctcgaggacccggcggccacgacc
gtgctggtgatctgccatccgggggacgtggacgggcgccgggcggcggtccgcctcctg
cgccaacggggctgggcggtggcctgcgagcccctgcgggatgaggccctggcgagctgg
ctggcggagcaggccgcagcatgggggaaggagctggagcccgaggccgtggcctggctg
ttggaatccggggagcccgacctgcagcggctggcgcgcgagatcgccaaggtggcgacc
tacgtcggggagcgccggcgcatcaccgccgccgacctccgggccgtcggcgtcgccgtc
gccaccgccggcgtgttcgagctgatcgacgcgatcctggccggtcgtcgacgccaggcc
atggagctgctgggccgcctgctggacgccgacgagccacccctgcggctcctcggcctg
atcgcccgccagtaccgcatcctcgcctacgcctgcggcctgcgggccgaggggggcgac
gtccaccgcttgcagcaggcgctgcggctgcatcccttcgtcgctcgcaaggcctggcgc
caagcccaggcggtgtcccccgaatgggcgctggcggccctggaggcggtgctggagacg
gacgtcgggatcaagcaggggcggtggcccgcccgcatcggcctggagcggctggtgtgg
cggctgagcggggccggctcgacccacggcgtggcgatgccccggagctga
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