KEGG   Thermococcus camini: TIRI35C_0476
Entry
TIRI35C_0476      CDS       T07551                                 
Symbol
rpl40e
Name
(GenBank) 50S ribosomal protein L40e
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
tcq  Thermococcus camini
Pathway
tcq03010  Ribosome
Brite
KEGG Orthology (KO) [BR:tcq00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    TIRI35C_0476 (rpl40e)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    TIRI35C_0476 (rpl40e)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:tcq03011]
    TIRI35C_0476 (rpl40e)
   04121 Ubiquitin system [BR:tcq04121]
    TIRI35C_0476 (rpl40e)
Ribosome [BR:tcq03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    TIRI35C_0476 (rpl40e)
  Archaea
    TIRI35C_0476 (rpl40e)
Ubiquitin system [BR:tcq04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   TIRI35C_0476 (rpl40e)
SSDB
Motif
Pfam: Zn_Ribbon_1 DZR Zn_ribbon_RPAB4 Ribosomal_L40e Toxin_5 DZR_2 Zn_ribbon_3 Zn_ribbon_10 HVO_0416 HypA
Other DBs
NCBI-ProteinID: CAD5243630
UniProt: A0A7G2D5M4
LinkDB
Position
TIRI35C:444790..444948
AA seq 52 aa
MARFPEAEARIFRKYVCMRCGATNPWKAKKCRKCGYKGLRPKAREPRGGMGR
NT seq 159 nt   +upstreamnt  +downstreamnt
atggcgagatttcccgaggctgaggccagaatctttaggaagtacgtgtgcatgcgctgc
ggtgccactaacccgtggaaggccaagaagtgcaggaagtgcggctacaagggtctccgc
ccgaaggcgagagagccgcgcggtggaatgggacgctga

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