Thermococcus camini: TIRI35C_0619
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Entry
TIRI35C_0619 CDS
T07551
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
tcq
Thermococcus camini
Pathway
tcq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tcq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TIRI35C_0619 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcq03021
]
TIRI35C_0619 (rpoA)
Enzymes [BR:
tcq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TIRI35C_0619 (rpoA)
Transcription machinery [BR:
tcq03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
TIRI35C_0619 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
MJ0401
Motif
Other DBs
NCBI-ProteinID:
CAD5243773
UniProt:
A0A7G2D5F8
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All DBs
Position
TIRI35C:complement(578099..580816)
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AA seq
905 aa
AA seq
DB search
MQSMKKIIGSIEFGILSPQEIRKMSAAEITVPDTYDDDGYPIEGGLMDKRLGVVDPGLRC
ETCGARAGDCPGHFGHVELARPIVHVGFAKTIHRVLESTCRECGRIKLTDEEIEEYTHKF
TVMGDRKKAKDRLIKEIHKKAKERMVCPHCGAPQFPIKFERPTIYWELRKDEEGNEYRHR
MMPSEVRDRLEKIPDKDLPLLGLHPEKARPEWMILTVLPVPPVTMRPSITLESGIRAEDD
LTHKLVDIIRINNRLKSNIEAGAPQLIIEDLWDLLQYHVTTYINNETSGIPPAKHKSGRP
LKTLSQRLKGKEGRFRGNLSGKRVNFSARTVISPDPMISINEVGVPMAVAMELTVPEKVT
EFNFEKLKRMVLNGPEKYPGANYVIDPEGRRIRLMENNLEIIAEKLDLGWTVERHLMDGD
IVLFNRQPSLHRMSIMAHRVRVMPYRTFRLNLSVCPPYNADFDGDEMNLHVPQTEEAQAE
ARILMEVQNHIISPRYGGPLIAGIQDHISGGYLLTREGAYFTRSEVEQMLMFAGIDIREL
PEPDKVENGVELWSGKTIFSLVLPEDLTIWYRNKLCDEPERCEALEKLIEEKLVPDPEEV
KKLAYDGFVYIQNGKLLSGAIDKKAYGREDGKLLDLIVREYGVERARQFLDQVTKLAIWT
ITHKGFTTAIDDEDLPSEALDRIHEIIREAEERVNRLIEAYKNGELEPLPGKTLEETLES
NIMAVLAEARDNAGKVAEKYLGMGNHAVIMAKTGARGKMLNITQMAAMLGQQSIRGKRLY
RGYRGRVLTHFKPEDLGARAKGFVTNSYKSGLTPQEYFFHAMGGREGLVDTAVRTAQSGY
MQRRLINALQDLKVDYDGTVRDPTGIIVQFKYGEDGIDPMKSWQGKTVDVDRVILRTLVK
MRGGE
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgatgaagaagatcatcgggagtattgaattcggtatcctctcaccccaggaa
atcagaaagatgagcgcggccgagataaccgtccccgacacctacgacgacgacggctac
ccaatcgaaggcggtctcatggacaaaagactgggtgttgttgaccctggacttcgctgt
gagacctgcggagcgagagctggagactgtccgggtcacttcggccacgttgagctcgcc
agacctatagtccacgtcggcttcgccaagaccattcacagggtcctcgagagcacctgc
cgcgagtgcggaaggataaagctcaccgacgaggagatagaggagtacacccacaagttc
accgttatgggcgacaggaagaaggccaaggacaggctcatcaaggagatccacaagaag
gccaaggagagaatggtctgccctcactgtggagcgccgcagttcccgatcaagttcgag
aggccgaccatctactgggagctcaggaaggatgaggagggcaacgagtacaggcacaga
atgatgccgagtgaagttcgcgacaggctcgagaagatacccgacaaggacttaccgctc
ctcggacttcaccctgagaaggccaggccggagtggatgatactgacggtcctcccggtt
ccgccggttaccatgaggccctccatcaccctcgagagcggcatcagagcggaggacgac
ctcacccacaagctggtcgatattatccgtatcaacaacaggctcaagtccaacatcgag
gccggtgcaccgcagctcatcatagaggacctctgggacctcctccagtaccacgtcacc
acctacatcaacaatgagacctcgggcattccgccggccaagcacaagagcggaaggccc
ctcaagaccctctcccagaggctcaagggtaaagaaggccgcttccgtggaaacctcagc
ggtaagcgtgtcaacttctcggcaagaaccgtcatcagccccgacccgatgataagcatc
aacgaggtcggcgttccgatggctgtggcaatggaactcaccgttccggagaaggtcact
gagttcaacttcgagaagctcaagaggatggtcctcaacgggccggagaagtatccagga
gccaactacgtcatcgaccccgagggaaggagaatccgcctcatggagaacaacctcgag
ataatagccgagaagctcgaccttggctggacggtcgagaggcacctcatggacggagac
atagtgctcttcaacaggcagccctcactccacaggatgtccatcatggcccaccgcgtt
cgtgttatgccgtacagaacattccgtctcaacctctcggtctgcccgccgtacaacgcc
gacttcgacggtgacgagatgaacctccacgtgccgcagaccgaggaggcgcaggctgaa
gcgaggatactcatggaggtccagaaccacatcatctcgccgaggtatggaggcccgctc
atcgccggaatccaggaccacatctccggcggctacctgctcacccgtgagggtgcctac
ttcacccgctcagaggtcgagcagatgctcatgttcgcgggaatcgacatccgcgagctt
cctgagccggacaaggtggagaacggcgtcgaactctggagcggaaagaccatcttctcg
ctcgtcctgccggaggacctcacaatctggtaccgcaacaagctctgcgacgagccggag
cgctgtgaggccctggagaagctcatcgaggagaagctcgtccccgacccggaggaagtc
aaaaagctcgcctacgacggcttcgtctacattcagaacgggaagctcctcagcggcgcc
atagacaagaaggcctacggaagggaggatggaaagctcctcgacctcatagtgagggag
tacggggtcgagagggcgaggcagttcctcgaccaggtcaccaagctcgccatctggacc
atcacccacaagggcttcaccaccgccatagacgatgaggaccttccgagcgaggccctc
gacaggattcacgagataatccgcgaggcggaggagagggtcaacaggctcatagaggca
tataagaacggtgagcttgagccgctgccgggtaagacccttgaggagaccctcgagagc
aacatcatggcggtcttagctgaggcgcgtgacaacgccggtaaggtcgctgaaaagtac
ctcggtatgggcaaccacgcggtcatcatggccaagaccggagcaaggggtaagatgctc
aacatcacccagatggccgctatgctcggccagcagtccatccgtggaaagcgcctctac
cgcggctaccgcggaagagtcctgacccacttcaagccggaagacctcggcgcgagggca
aagggattcgtcaccaactcctacaagagcgggcttacgccgcaggagtacttcttccac
gcaatgggtggacgtgagggactggttgatacggccgttagaacagctcagagcggttac
atgcagagaaggctcatcaacgccctccaggacctcaaggtggactacgacggaaccgtg
agagacccgaccggaattatcgtccagttcaagtacggtgaggacggcatcgacccgatg
aagagctggcagggcaagaccgttgatgttgacagggtcatccttagaaccctcgtcaag
atgaggggaggtgagtga
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