KEGG   Thermococcus camini: TIRI35C_1564
Entry
TIRI35C_1564      CDS       T07551                                 
Symbol
fen
Name
(GenBank) Flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
tcq  Thermococcus camini
Pathway
tcq03030  DNA replication
tcq03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tcq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TIRI35C_1564 (fen)
   03410 Base excision repair
    TIRI35C_1564 (fen)
   03450 Non-homologous end-joining
    TIRI35C_1564 (fen)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tcq03032]
    TIRI35C_1564 (fen)
   03400 DNA repair and recombination proteins [BR:tcq03400]
    TIRI35C_1564 (fen)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tcq04147]
    TIRI35C_1564 (fen)
DNA replication proteins [BR:tcq03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    TIRI35C_1564 (fen)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     TIRI35C_1564 (fen)
DNA repair and recombination proteins [BR:tcq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     TIRI35C_1564 (fen)
Exosome [BR:tcq04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   TIRI35C_1564 (fen)
SSDB
Motif
Pfam: XPG_I XPG_N DUF8272 5_3_exonuc 5_3_exonuc_N
Other DBs
NCBI-ProteinID: CAD5244718
UniProt: A0A7G2D9Q2
LinkDB
Position
TIRI35C:1455921..1456946
AA seq 341 aa
MGVQIGELIPRKEIELENLYGRKVAIDAFNAIYQFLSTIRQRDGTPLMDSRGRITSHLSG
LFYRNINLMEAGIKPAYVFDGKPPEFKKREIEKRREAREEAEEKWYEALERGDLEEAKKY
AMRATRVNEGLINDAKRLLELMGIPVVQAPSEGEAQAAYMAARKKVYASASQDYDSLLFG
APRLVRNVTITGRRKLPGKNVYVEVRPELIVLEEALKELGIDREKLIEMAILVGTDYNPG
GIKGIGPKKALTIVKRSKDPLKKYNKEGEVDLYAIKEFFLNPPVTDEYELKWREPDEEGI
LRFLCDEHDFGEERVKNGLERLKKAVKAGKQATLESWFGKR
NT seq 1026 nt   +upstreamnt  +downstreamnt
atgggtgtacagataggcgagctcattccgaggaaagagatagagctggagaacctgtac
ggcaggaaagttgctatagacgctttcaacgccatctatcagttcctctcgaccataaga
cagcgcgatgggacgccgctcatggactcccgcggaaggataacctcccatctgagcggc
ctcttctacaggaacatcaacctcatggaggctgggataaagcccgcctacgttttcgac
ggaaagccgccggagttcaaaaagagggagatagaaaagcgccgggaggcgagggaagag
gcggaggagaagtggtatgaggccctggagcgcggcgaccttgaagaggccaagaagtac
gcgatgcgtgcaaccagggtcaacgagggcctgataaacgacgccaagaggctccttgag
ctgatgggaattcccgtagttcaggcgccgagcgagggtgaggcccaggccgcctacatg
gccgccagaaagaaggtctatgcatcggccagtcaggactacgactcacttctctttggg
gccccaaggctggtgaggaacgtcacgataaccggccggagaaagctcccagggaagaac
gtctacgttgaggtcagacccgagctcatagtcctggaggaagctcttaaagaactgggc
atagacagggaaaagctcatcgagatggctatactggtcggcacggactacaaccccggc
gggataaagggaatcggcccgaaaaaggctctgaccatagtcaagcgcagcaaagacccg
ctgaagaagtacaacaaggagggtgaagttgacctctacgcgataaaggagttcttcctg
aacccgccggtcacggacgagtacgagctcaagtggcgcgaaccggacgaggagggaatc
ctcaggttcctctgcgacgagcacgacttcggcgaggaacgcgttaaaaatggtcttgag
aggctgaaaaaggcggtaaaggcgggaaagcaggccacactggaaagctggttcgggaag
cgctga

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