Thermococcus camini: TIRI35C_1880
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Entry
TIRI35C_1880 CDS
T07551
Symbol
rfcL
Name
(GenBank) Replication factor C large subunit
KO
K04800
replication factor C large subunit
Organism
tcq
Thermococcus camini
Pathway
tcq03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
tcq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TIRI35C_1880 (rfcL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tcq03032
]
TIRI35C_1880 (rfcL)
DNA replication proteins [BR:
tcq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
RFC (replication factor C)
TIRI35C_1880 (rfcL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Rad17
AAA_14
AAA_22
RuvB_N
nSTAND3
AAA_5
DUF815
AAA_28
AAA_16
AAA_17
AAA_30
AAA_6
AAA_11
RCF1-5-like_lid
AAA_33
TIP49
AAA_25
Zeta_toxin
AAA_18
AAA_19
ResIII
TsaE
AAA_24
PPV_E1_C
AAA_7
Hydin_ADK
IPT
UBA_Rad5
ABC_tran
NPHP3_N
DNA_pol3_delta2
IstB_IS21
L_biotic_typeA
AAA_assoc_2
Parvo_NS1
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
CAD5245034
UniProt:
A0A7G2D9Q5
LinkDB
All DBs
Position
TIRI35C:complement(1723237..1724724)
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AA seq
495 aa
AA seq
DB search
MAMPREVPWVEKYRPRRLDEIVGQTKAIEQVKAWIGAWLEGKPPKKKALILAGPPGTGKT
TTVYALAREYGFEVIELNASDERTYEKIERYVQAAYTMDILGKRRKLIFLDEADNIEPTG
AREIAKLIDKARNPIIMSANHYWEVPREIRSRAQIVEYKRLTQRDIIKALARILHHEGKR
VPKELLYDIAKHAGGDLRAAVNDLQTVVTGGVEDAAQVLAYRDTEKSVFQALAQIFATDN
AKKARMATLGVDMFPHELLQWIDENVPYVYYRPEDIARAYEALSRADIYLGRAQRTGNYG
LWKYATDMMTAGVAVAGVKKKGFVRIYPPKTIKLLTESKAERGLRDSVVKKIMSEMHMAK
LEALETLNYLRAIFENSADVAAHFVVFLELTEKEVEFIAGDRERARTIWAKSLNIHKKLK
ERGELEGHVEAAVEKESGETGPKEEAVEALEEISEEELEKAEEEMESVEEPKESGKVDKP
GKKGKQATLFDFLKK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggccatgccgagggaagtgccctgggtcgagaagtacaggccgagacggctggatgag
atagtcggtcagaccaaggccatagagcaggttaaggcctggataggggcgtggctggag
gggaagcccccaaagaagaaggccctcatcctcgctgggccgcccggaaccggtaagacg
accaccgtctatgccctggccagggagtatggtttcgaggtcatagagcttaacgcgagc
gacgagaggacgtacgagaagatagagcgctacgttcaggccgcctacactatggacatc
ctcggaaagaggcggaagctcatattcctggatgaggccgacaacatcgagccgacgggg
gcgagggagatagcgaagctcatcgacaaagccagaaaccccatcataatgagcgccaac
cactactgggaggttcccagggagatacggagcagggcgcagatagtggagtacaagcgc
ctgacccagcgcgacatcatcaaagccctcgccaggatactccaccacgagggtaagagg
gttccaaaggaactgctctacgatatcgccaagcacgcgggcggcgacctccgtgccgcg
gtgaacgatctgcagaccgtcgtcacgggcggggtcgaggacgcggcccaggttctggcc
taccgcgacaccgagaagagcgtcttccaggcactggcgcagatttttgccacggacaac
gcgaagaaagccaggatggcaacgctcggtgttgacatgttcccccacgaacttcttcag
tggatagacgagaacgtcccttacgtctactacaggcccgaggacatagcgagggcctac
gaagctttgagcagggctgacatatacctcggcagggcgcagaggaccgggaactacggc
ctctggaagtacgccacggacatgatgacggcgggggttgccgtggcgggtgtcaaaaag
aagggtttcgtgcggatttatcccccgaagacgataaagctcctcacggagagcaaggcg
gagaggggcctccgcgattcggtcgtcaagaagataatgagcgagatgcacatggcaaag
ctggaggcgctggagaccctcaactacctcagggcaatatttgagaacagcgcggacgtt
gcggcgcacttcgtcgtcttcctcgagctgacggagaaagaggtggagttcatcgccggc
gacagggagagggcgaggacgatctgggcaaagagcctcaacatccacaagaagctcaag
gagcgcggtgaactggaggggcacgtggaggccgcggtcgagaaggagtccggggagacc
gggccgaaggaggaggctgtggaagccctggaggagataagtgaggaagagcttgagaag
gccgaggaagagatggagagcgtggaagagccgaaggagtccggaaaggtggacaagccc
gggaagaagggcaagcaggcgacgctgttcgacttcctgaagaagtga
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