Thermococcus camini: TIRI35C_1881
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Entry
TIRI35C_1881 CDS
T07551
Symbol
rfcS
Name
(GenBank) Replication factor C small subunit
KO
K04801
replication factor C small subunit
Organism
tcq
Thermococcus camini
Pathway
tcq03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
tcq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TIRI35C_1881 (rfcS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tcq03032
]
TIRI35C_1881 (rfcS)
DNA replication proteins [BR:
tcq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
RFC (replication factor C)
TIRI35C_1881 (rfcS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_3
Rep_fac_C
Intein_splicing
AAA
DNA_pol3_delta2
HTH_3
RCF1-5-like_lid
RuvB_N
AAA_assoc_2
HTH_19
Mg_chelatase
LAGLIDADG_WhiA
Rad17
PT-HINT
Hint
HTH_26
Vint
SET7_N
TPR_7
Motif
Other DBs
NCBI-ProteinID:
CAD5245035
UniProt:
A0A7G2D9W5
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All DBs
Position
TIRI35C:complement(1724724..1727324)
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AA seq
866 aa
AA seq
DB search
MPEEIQEVKILEKPWVEKYRPQRLDDIVGQAHIVKRLKHYAKTGSMPHLLFAGPPGVGKC
LTGDAKVIANGELTTIGELVEKVSNGRFGPTPVKGLRVLGINEDGKLTELPVEYVYKDRT
DELVRIMTRLGRELKVTPYHPLLVNRKNGKTEWVKAEELKPGDRLAVPRFLPAVLDEDPL
SEWLGYFIGDGHSDAQGNVITFTNTDEKLRKRFMELTERLFSDAKIKERIHKNRAPDVYV
NSKVAKELVKSLGLAGRKAHRVYIPQQGWKGLRSFLRAYFDCDAGVEKNGIVLSTASREM
AEQVTYALAGLGVVAKVKNRIVKGRTYYYVVISGTENISRFLSEVGFSVEEKRKKAEALV
KRPNPNLGSLYADRELISYVRNRLKLNFYDDKIRWSPEKAKRIAWELMKEIYHHLDELDR
LEKALSRSIVIDWDEVARRRKEIAEKTGIRADRILEYINGKRKPSLKNYLRIAKALGIGL
EETIEAMRTFARKYSSYAEIGRLVGTWNSSVRVVLESNTGKIETLEEIRKAELRLLREVL
NDEKLKRGVAYLIFLAQNELLWDEIVDVEKLKGDFVIYDLHVPKYHNFIGGNLPTVLHNT
TAALALARELFGENWRHNFLELNASDERGINVIREKVKEFARTKPIGGANFKIIFLDEAD
ALTQDAQQALRRTMEMFSNNVRFILSCNYSSKIIEPIQSRCAIFRFRPLNDEDVAERIRY
IAENEGLELTEDGLQAILYVAEGDLRRAINVLQAAAALDKTITDENVFLVASRARPEDVR
DMMNLALEGNFLKAREKLREILLKQGLSGEDVLIQMHREVFNLPIPEDRKVALADKIGEY
NFRLVEGANEMIQLEALLAQFTIMGK
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgccggaagagattcaggaagttaagattctcgaaaagccctgggttgaaaagtacagg
ccccagcggctcgatgatatagtcggtcaggctcacatagtcaagaggctcaagcactac
gccaaaaccggctcgatgccgcaccttttatttgccgggccgcccggcgttggaaagtgc
ctcacgggtgatgccaaagtcatagccaacggtgagctgacaactataggagagctcgtc
gagaaggtgagcaacggcaggtttggcccaacccctgttaaaggtcttagggttcttggc
attaacgaagatggtaaactcactgagttgcccgtcgagtacgtttacaaggataggaca
gatgaactcgtcagaataatgacgaggcttggcagggagcttaaggttacaccctaccac
cctctccttgtgaacagaaagaatggaaaaactgagtgggttaaggccgaggagcttaaa
ccgggagatagactggccgttccgcgcttccttccggctgtgcttgatgaggatcctctg
tcagaatggctcggttacttcatcggcgacggacactccgatgctcagggcaatgtcatc
acttttacgaacacggacgaaaagcttagaaagcgctttatggagcttaccgagagactc
ttctctgatgcaaaaatcaaagaaagaattcacaaaaaccgcgctccggatgtttacgtg
aactcgaaggtggcgaaggagctcgttaagagccttggccttgcaggcagaaaagctcac
agagtttacatacctcagcagggatggaagggattgcgctccttcctacgggcgtacttc
gactgcgatgccggagtggagaagaacggtatagttctctcgactgcgagcagggagatg
gcggaacaggtaacttatgcactcgcagggcttggagtggttgccaaggttaaaaaccgg
atcgttaagggacgcacctactattacgtggtcatctccggcacggaaaacatctcacgc
ttcctttctgaggttggtttttcagtggaggaaaagaggaaaaaagccgaagctttggtg
aagagaccgaaccccaacctcggctcgctttatgccgacagagagctaatttcctacgtt
agaaataggctcaagcttaacttttacgacgacaaaatcagatggagtccggaaaaggct
aaacggatagcttgggagctaatgaaagagatctaccaccacctcgatgagctcgatagg
ctcgaaaaggctctgtcaaggagtatagttatagactgggacgaggtcgctaggagaagg
aaggagatagcggagaagactgggataagggcggatcggattcttgaatacattaatggt
aagcggaagccaagcttaaagaactacctcaggatcgcaaaagcccttggaattgggctt
gaggagacaatagaggccatgagaacctttgccaggaagtattccagctacgctgagatt
ggacggcttgttggaacctggaattcaagcgtcagggtggtccttgagagcaacacgggg
aagatagaaaccctcgaagaaataaggaaagccgagctgaggctcttgagggaggttctc
aacgacgagaagctcaagaggggcgttgcctaccttatcttcctcgcccagaacgagctc
ctctgggacgagatagttgatgtcgaaaaactcaaaggcgatttcgtaatctacgacctc
cacgttcccaaataccataacttcatcggcgggaaccttccaacggttctccacaacaca
actgcggctttggcccttgcgagggagcttttcggtgaaaactggcgccacaacttcctc
gagctgaacgcgagcgatgaaaggggcataaacgtgattagggagaaggtgaaggagttc
gcaagaaccaagccaataggcggggcgaacttcaagataatcttcctcgacgaggcagat
gctttaacccaggacgcccagcaggcgctgaggagaacgatggagatgttctcgaacaat
gtgaggtttatcctgagctgtaactactcctcaaagataatcgagccgatacagtcgagg
tgcgccatcttccgcttcaggcccctcaacgacgaggacgtggccgagcgcatacggtac
atagccgagaacgaggggcttgagctgacggaggacggccttcaggccatactgtacgtt
gccgagggtgacctcaggagggcgataaacgtcctgcaggcggccgcggcgctcgataaa
acgataaccgacgagaacgtcttcctcgttgcgagcagggccaggccggaggatgtgcgt
gatatgatgaacctggcactggagggcaacttcctcaaggcgagggagaagctcagggag
attctcctcaagcagggcctcagcggcgaggacgtgctgatccagatgcacagggaggtc
ttcaacctgccgattcccgaggacaggaaagttgcactggcggacaagataggggagtac
aacttccgcctcgttgagggcgccaacgagatgatacagctcgaggctctcctggcgcag
ttcaccataatgggcaagtga
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