Thermococcus camini: TIRI35C_1885
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Entry
TIRI35C_1885 CDS
T07551
Symbol
endA
Name
(GenBank) tRNA-splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
tcq
Thermococcus camini
Brite
KEGG Orthology (KO) [BR:
tcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcq03016
]
TIRI35C_1885 (endA)
Enzymes [BR:
tcq01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
TIRI35C_1885 (endA)
Transfer RNA biogenesis [BR:
tcq03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
TIRI35C_1885 (endA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Sen15
Motif
Other DBs
NCBI-ProteinID:
CAD5245039
UniProt:
A0A7G2D913
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All DBs
Position
TIRI35C:complement(1730050..1730565)
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AA seq
171 aa
AA seq
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MKEPVIFQLSGDRVFSEREKAINQFYNKRYFGEVINGKLFLSLIEAAYLMEKGKIRVFDG
EKELSFRELVELGRKRDDQFDIKLLVYTDLRDRGYTVKSALKFGSHFRVYRRGMDEHSQW
LIWVVPENMRFSPNDITARVRVAHGVRKNMVMAVVDEDNDVVYYKIEWVKF
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggagccggtaatcttccagctgagcggcgacagagtcttcagcgagcgtgaaaag
gcgataaaccagttctacaacaagcgctactttggggaagtcattaacgggaagctcttt
ctctcgctcatagaggcagcatacctcatggaaaagggcaagataagggtctttgatggt
gaaaaggaactctctttcagggagctggtcgaactcgggaggaagagggacgaccagttc
gacattaagctgctcgtttacacggatttgcgagacaggggctacaccgtcaagtcagcc
ctcaagttcggctcccacttccgcgtttacaggcgcggaatggacgagcactcccagtgg
ctgatatgggtcgttcctgaaaacatgcgcttttccccgaacgacattactgcccgagtt
agagtggcccacggcgtcaggaagaacatggtgatggccgtcgttgacgaggacaacgac
gtggtgtactataaaatagaatgggtgaagttctga
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