Thermococcus camini: TIRI35C_1974
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Entry
TIRI35C_1974 CDS
T07551
Symbol
tfe
Name
(GenBank) Transcription factor E
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
tcq
Thermococcus camini
Pathway
tcq03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tcq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TIRI35C_1974 (tfe)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcq03021
]
TIRI35C_1974 (tfe)
Transcription machinery [BR:
tcq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
TIRI35C_1974 (tfe)
Prokaryotic type
Archaeal type
TFE
TIRI35C_1974 (tfe)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
DUF7342
TrmB
GntR
Phage_rep_org_N
HTH_5
Prefoldin_2
Zn_Ribbon_TF
Sigma70_r3
HTH_20
PLC-beta_C
HTH_Crp_2
HTH_9
HTH_Cmi2_C
Rad50_zn_hook
POLR3C_WHD
Motif
Other DBs
NCBI-ProteinID:
CAD5245128
UniProt:
A0A7G2D9K2
LinkDB
All DBs
Position
TIRI35C:complement(1810923..1811459)
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AA seq
178 aa
AA seq
DB search
MARRKNKELLELAMDMGGEEAVEVIKALEKKKEATDEELAEITEIRVNTVRKVLYMLYDQ
GLAEFKRIRDKETGWYYYYWRLEIKRLPEIIRSRKMAELKKLREMLEEETSEIYYHCGTP
GHPKLTFDEAMEYEFQCPICGAMLMQYDNTEVVEELKRRIEELEIELGLRKKPRKKSN
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaggcggaagaacaaggagctcctcgaacttgcaatggatatgggcggcgaggag
gccgttgaggtaattaaggctctcgagaagaagaaggaagccacggacgaggaacttgcg
gagataacggagatacgcgttaatacggtgagaaaggttctctacatgctctacgaccag
ggcctggctgagttcaagcgcatccgcgacaaggagaccggctggtattactactactgg
cgccttgagatcaagcgcctcccagagataatccgctccagaaagatggctgagctcaag
aagctcagggagatgctggaggaggagaccagcgagatatactaccactgcggtacaccg
ggtcatccaaagcttaccttcgacgaggccatggagtacgagttccagtgcccgatatgt
ggtgcgatgctcatgcagtacgacaacaccgaggtcgtggaggagctcaagagacgcatc
gaggagcttgagatagaacttggcctcaggaagaagcccagaaagaagtccaactga
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