Thermococcus camini: TIRI35C_2018
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Entry
TIRI35C_2018 CDS
T07551
Name
(GenBank) Type-4 uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tcq
Thermococcus camini
Pathway
tcq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tcq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TIRI35C_2018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcq03400
]
TIRI35C_2018
Enzymes [BR:
tcq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
TIRI35C_2018
DNA repair and recombination proteins [BR:
tcq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TIRI35C_2018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CAD5245172
UniProt:
A0A7G2DB63
LinkDB
All DBs
Position
TIRI35C:complement(1851103..1851690)
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AA seq
195 aa
AA seq
DB search
MGKEELMRKLEERIRNCQKCPLGRLRTNAVPGSGSYDAKVMFIGEAPGYWEDQKGLPFVG
RAGKVLDELLAEIGLTREEVYITNIVKCRPPENRDPLEDEIKACSPYLDRQIDIIRPRVI
VPLGRHSMRYILEKFGFEPEPISKIHGKTFEAHTLFGKIIIMPMYHPAAALYRPPIKEEL
RKDFLRLGELIGSSL
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggaagaactcatgaggaagcttgaagagcgcataaggaactgccagaaatgt
cccctcgggaggctcagaaccaacgcagttcccggctcgggaagctacgacgctaaggtg
atgttcatcggggaagcgccgggctactgggaagaccagaagggcctacccttcgtcgga
agggcgggaaaggtactcgacgagctcctggccgagataggtctcaccagggaggaggtt
tacataaccaacatcgtcaagtgccgcccgcccgagaaccgcgacccgctggaggatgag
ataaaggcctgctccccctacctcgacaggcagatagacatcatcaggcccagggttata
gttccgctcggcaggcactccatgaggtacatcctggagaagttcggctttgagccagag
cccataagcaagatacacggaaaaaccttcgaggcccacaccctcttcggaaagataatc
ataatgccaatgtatcacccggccgccgcactctatcggccgcccataaaggaggagctc
agaaaggactttcttaggctcggggagctcatcggttcctcactatga
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