Trypanosoma cruzi: 482471.19
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Entry
482471.19 CDS
T01012
Name
(RefSeq) ATP-dependent DEAD/H RNA helicase
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
tcr
Trypanosoma cruzi
Pathway
tcr03013
Nucleocytoplasmic transport
tcr03015
mRNA surveillance pathway
tcr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
482471.19
09122 Translation
03013 Nucleocytoplasmic transport
482471.19
03015 mRNA surveillance pathway
482471.19
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcr03019
]
482471.19
03041 Spliceosome [BR:
tcr03041
]
482471.19
Enzymes [BR:
tcr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
482471.19
Messenger RNA biogenesis [BR:
tcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
482471.19
Spliceosome [BR:
tcr03041
]
Complex C
Other components
EJC/TREX
482471.19
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
482471.19
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
CMS1
Cache_3-Cache_2
Motif
Other DBs
NCBI-GeneID:
3532243
NCBI-ProteinID:
XP_802802
UniProt:
Q4CM53
LinkDB
All DBs
AA seq
209 aa
AA seq
DB search
MSSGLADFDGDDVKVPIVSAQPHMGVGMGTHSAVALGGFQDFCLKSELANAIRENGFEHP
SEVQHQALPQAMLGADILAQAKSGMGKTAVFVFALLEQIEKVPEGQKPHCQAIVVVHARE
LAYQIEQEFKRFNKYLPYCTTGVFFGGIPEDENVKQLKKEVPAIVVGTPGRLSALIQRKA
LEVSRVKWFVVDEFDRCLEDVKMRREYRR
NT seq
628 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtggacttgccgactttgacggagatgatgtgaaggtgccgattgtgtccgca
cagccacatatgggtgtgggcatgggaacacacagtgccgttgccctgggggggtttcag
gacttttgtctcaagagcgaactcgccaacgccatccgcgagaacggctttgagcaccca
agcgaagtgcaacatcaggcattgccgcaggcgatgcttggcgctgacattcttgcgcag
gccaagtccggtatggggaagacggctgtctttgtctttgcgctgttggagcaaattgaa
aaggtgccagaggggcagaagccgcattgtcaggcaattgttgtcgtccacgcccgagag
ttggcgtaccagattgagcaggagttcaagcggtttaacaagtatttgccgtattgcacc
actggtgtcttttttggtggaatcccagaggacgaaaacgtgaagcagctcaaaaaggaa
gtccccgcgatagtggtgggaacaccggggcgcctcagcgcacttattcagcgcaaggct
ctcgaagtgtcgcgcgtcaagtggtttgtcgtggatgagtttgaccgctgtttagaggat
gtaaagatgcgccgtgagtacagacggt
DBGET
integrated database retrieval system
