Trypanosoma cruzi: 503911.20
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Entry
503911.20 CDS
T01012
Name
(RefSeq) pre-mRNA splicing factor ATP-dependent RNA helicase
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
tcr
Trypanosoma cruzi
Pathway
tcr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
503911.20
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcr03041
]
503911.20
03009 Ribosome biogenesis [BR:
tcr03009
]
503911.20
Enzymes [BR:
tcr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
503911.20
Spliceosome [BR:
tcr03041
]
Complex A
U2 snRNP components
U2 related factors
503911.20
Complex B
503911.20
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
503911.20
Ribosome biogenesis [BR:
tcr03009
]
Eukaryotic type
90S particles
Helicases
503911.20
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_N
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
AAA_7
ABC_tran
ResIII
AAA_16
SRP54
T2SSE
nSTAND3
TniB
AAA_30
AAA_29
Motif
Other DBs
NCBI-GeneID:
3533146
NCBI-ProteinID:
XP_803872
UniProt:
Q4CP19
LinkDB
All DBs
AA seq
710 aa
AA seq
DB search
MEAGKNPYNGRVLSPRYYTLLRGREKLPVFAAKDKIQRLVARYQTLLLVGETGSGKTTQV
PQFVLEMNPEHAIACTQPRRVAATSVSERVAEELDVTLGEEVGYTIRFDDMSSERTRLKY
LTDGMLLREAMSDPLLRRYSVIILDEAHERTVHTDVLIGVVKELLPRRPELRVVVMSATL
EERRFQVYFPEAPLVHIAGRMFGVEVYFSRSPEANYVEAAIRTATQIHLYEGEGDILIFL
TGEDEIEQTVERLQKGICMAEHSSADCHKGPVVVLPLYSALPPQQQRKVFQKVPPGTRKI
VVATNVAETSLTIDGVVFVVDSGFSKQKVFNPKLRVESLLVTPISQASARQRCGRAGRTK
PGKCFRLYTTKAFDTLLQPQTYPEILRCNLGSVVLHMKMMGVEDLVNFDFVEPPAPETLM
RALELLNYLGAINDDGDITEIGRRMAEFPLEPEMAAMLLHSPEYGCSDDIARICAMLSVQ
SPFVTPTNDQRGRAMRCREQFSHPTGDHVAFLNAFNAFYDANNKSAAWASENYLNPRVMR
QAVSIYRQLLGVMRRLGRDVCSTYSRPPTRAPRETDVKDEFANEIRRAILRGYFTKVALS
LPTKNQFMTLKDDVKCLLFPSTFLNRRPKFVVFNELVLTSNNYIRTVTAVADEWLLEASP
AYFAREEFDGVSRQVFEELHRRHHRHAENRGGCSEKRHRTFDDDDDSESS
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggaggctggcaagaacccatacaatggacgggtgttgagtccccgctactacacgttg
ttgcgtgggcgcgagaagttgccggtgtttgctgcaaaggataaaattcagcgacttgtg
gcgcgttaccagacacttcttctggtgggagaaacagggagcggtaagacgacgcaggtg
ccacagtttgttctggagatgaaccctgaacatgcaattgcgtgcacgcagccgcgtcgt
gtggcggccaccagcgtcagtgagcgtgtggcggaggagttggatgtcacgctcggtgag
gaggttgggtacaccattcgatttgatgacatgagcagcgagaggacgcggctaaagtac
ttgacggatggcatgctgcttcgggaggccatgagcgacccactgctgcggcggtacagt
gtcatcatcctcgacgaggcccatgagcgtacggtccacacagatgtgttgattggtgtc
gtgaaggagttgttgccgcggcgaccggaattacgcgtcgttgtgatgtccgcaacgttg
gaggagcggcgctttcaagtgtactttccggaggcacccctggtgcacattgccggccgt
atgtttggtgtggaggtgtacttctcgcgatcgcccgaggcaaactacgtggaggcggcg
atacgcacggcgacgcagattcacctgtacgagggtgagggcgatattctcatttttctc
accggcgaggacgagattgagcagacggtggagcgactgcagaaagggatttgtatggcg
gagcacagcagcgcggactgccataaggggcctgtcgtggttctcccgttgtactccgcc
ctcccgccccagcagcagcggaaggtctttcagaaggtcccgcccggcacacggaagatt
gtcgtggcaacgaacgtggcggagacatccctcaccatcgacggtgtcgtctttgtcgtc
gacagtggcttctccaagcagaaggtgtttaacccaaagttgcgtgtcgagtcccttttg
gtgacaccgatcagtcaagcgagcgcacggcagcgctgcggtcgtgccggtcgtaccaag
ccggggaagtgtttccgcctctacaccaccaaagcgtttgacacacttctgcagccgcag
acgtaccctgaaattctgcgctgtaacttgggttccgttgttttgcacatgaagatgatg
ggtgtggaagacctggtgaactttgactttgtggaaccaccggccccggaaacgctcatg
cgggcgctggagcttttgaattatttaggcgccattaatgacgacggagacatcacggaa
attggccgccggatggcagagtttccgttagaacctgagatggcggcgatgttgctacat
agccccgagtatggctgttcagacgatattgcacgtatttgcgcgatgctatccgtccaa
agtccctttgtgacccccaccaacgaccaacgagggcgtgcaatgcggtgccgggagcag
tttagccacccaacaggggaccatgtcgcatttttgaacgcctttaatgcattttacgac
gccaataacaaaagtgcagcatgggcatcggaaaactacctcaatccacgtgtcatgagg
caggccgtcagcatttaccggcagctgcttggcgttatgcgtcgactgggccgcgatgtt
tgcagcacatattcccgtccaccgactcgagccccgagagaaactgacgtcaaggatgag
ttcgcaaatgagatacgccgcgccattcttcgcgggtacttcaccaaagttgccctctcg
ctgccaaccaagaatcaatttatgacgctgaaggacgatgtcaagtgtcttctattccct
tccacgtttcttaaccgccgtccaaagttcgtcgtgtttaacgagcttgtactcaccagt
aataattacatccgcaccgtgacggcagtggccgacgagtggctgctggaggcaagcccg
gcttattttgcgcgggaggagttcgacggggtcagcaggcaggtgtttgaagagttgcac
cgccgtcatcatcgtcatgcagagaaccgtggcgggtgcagcgagaagcgtcaccgtacc
tttgacgacgacgacgactccgagtcatcgtag
DBGET
integrated database retrieval system
