Trypanosoma cruzi: 504109.110
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Entry
504109.110 CDS
T01012
Name
(RefSeq) cleavage and polyadenylation specificity factor
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
tcr
Trypanosoma cruzi
Pathway
tcr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tcr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
504109.110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcr03019
]
504109.110
Messenger RNA biogenesis [BR:
tcr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
504109.110
U7-dependent histone pre-mRNA processing factors
504109.110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF100_C
Lactamase_B_6
Beta-Casp
Motif
Other DBs
NCBI-GeneID:
3548792
NCBI-ProteinID:
XP_816840
UniProt:
Q4DR37
Q6BCB1
LinkDB
All DBs
AA seq
802 aa
AA seq
DB search
MLRASASSIKLTNLYGAPTGDTYHPSTPFANLIEIDGVRILLDCGWNDEFDVNFLDALMP
YLGDVHAVLFSTPELVSCGALPFVMEHIPTGTCVAAAGSTAKMGLHGVLHPFLYLFPNVK
TWRLENGLDFEMTVDKVYSAFRSVTEPYGGKVTIRHRDAEVECYPIFSGRMLGGHGWLIK
YKIDELFYCPDFSLKPSYALKRFLPPTTSTLLFIDGSPFHLSGNTGRKYEEQLNALIREI
LGTLRNGKDVLIPVSVVGRGLEILTIVTHLLTEKGGDNYTVVFASIQAAELVAKASTMTE
ALLDEIILSERQLFANVVTCKTAEEVLSVAGPKICIADGETLDYGVSAELLGHFLQADAD
ERENLVVLTGAPKPHTNAFTMAAAKKGDAIDLRYTIRSPLGKEELEEYYLQIELEMEEQR
KALEGGAYEVASLEDENSDNDNDAGKEDEKQLRVTQQCTPGLVLPSYMSFVSKHLQFPIL
ETAASLANAMFKKVDYAYGLPISEEMQFLMRRKAPARIYSDEGPEGIQMHNDAQAEANIP
SKTFVNTAVVSKNSRVFMTDLSGFADAAIMRSLLKSRFSFAKKIVLIRGTVDDHRALYQF
CRSEKVMKCGENVFFPRTQRTHLELATHVYSYMVQLDPTLANALPSALRRVKESRSSGFW
DVGWVDGALESSFVSLTPEDDERQSVKRLRAEGNDGEIKDGVFTLVPLFGERAQQCARER
ELRGMQRGLFYVGDVDLHRLRDVARSEMGLRGEFHKNAPMLVFDAGLCVRKSANGNFSLS
SMISPSVFALRKTVYGQFSQTL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgctacgggcttcggcgagctcgatcaagctgacgaacctgtacggggcgccaacaggg
gatacataccacccgagcacaccgtttgccaatttaattgagattgatggcgtgcggatt
cttctggactgcgggtggaacgatgagtttgatgtcaattttcttgatgcactgatgcct
tacttgggtgatgtgcacgctgtgctcttttcgactcctgaactcgtctcatgtggagca
ctcccatttgtgatggagcacattcctacaggcacgtgcgtagctgctgcgggttccacg
gccaagatgggtctgcacggggtcctgcatccatttctttacctgtttcctaacgtcaaa
acttggcggctggaaaacggtcttgattttgaaatgacagttgacaaggtatacagtgcc
tttcgaagtgtgacggagccttatgggggcaaggtaacaattcgtcatcgagatgctgaa
gtggagtgctatcccattttttctggtcgaatgcttggaggacatgggtggcttattaag
tataaaattgatgagcttttttattgccctgatttttctttgaagccatcctatgcgctt
aaacgctttttaccaccaacaacgtcaacacttctttttattgacggatcgccatttcat
ttaagcggtaatactgggcggaaatacgaagaacagttgaatgctttaattcgagagatt
ttgggtacacttcgtaatgggaaggacgttttgatcccagtttctgttgttggaagggga
ctggagatactcacaattgtcacacacctccttacggagaaggggggtgataattatacg
gttgtttttgcctctatacaagcggcagagctagtagcgaaggcgagcactatgacagaa
gctcttttggatgagatcattctcagtgaaagacagttatttgccaatgtggtgacttgt
aaaacagccgaggaagtgttgagtgtagccggaccaaaaatatgcatcgccgatggtgag
acccttgattatggagtgtcagctgagcttttagggcattttttgcaagcggatgcagat
gagagggagaacctagttgtactaacaggggcacctaaaccacatacaaatgcctttacg
atggctgcggccaagaagggggatgctattgatttgcgttacacaattcgatcaccgctt
ggaaaagaggaattagaagagtattatctccaaattgagttggaaatggaggaacagagg
aaggcgttagaaggcggcgcttatgaggtggcctcacttgaggatgagaatagcgataat
gacaacgatgcaggcaaggaggacgaaaagcaattgagggtgacacaacagtgtacgcct
ggccttgttctcccctcttatatgagttttgtttctaaacatcttcaatttcccattttg
gagacggcagcatcattagctaatgcgatgtttaaaaaagtggattatgcatatggtctt
cccattagtgaagaaatgcagttccttatgcgtcgaaaggctccagctcgaatttacagt
gatgagggacccgaagggatacaaatgcataatgatgctcaggctgaggcgaatattccc
tccaagacatttgtgaacactgctgtggtaagtaaaaattcacgtgtttttatgacggac
ctttcaggatttgcagatgcggctattatgcggagcctgttaaagtcccgttttagtttt
gctaaaaagattgtactgatccgtgggactgtcgatgatcaccgtgcgttgtatcagttt
tgtcgatcggaaaaagtaatgaagtgcggcgagaatgttttttttccgaggacgcagaga
actcacttggaacttgcgacgcacgtgtactcttatatggtgcaattggacccaacattg
gctaatgcacttccttccgctttacggcgcgtcaaggagtcaagatcaagtggcttttgg
gatgtggggtgggtggatggtgccctggagagttcttttgtttcgctgacacctgaagac
gacgagaggcagtcggtgaagcgacttcgagcggaaggaaatgatggcgaaataaaggac
ggcgtcttcaccctggtccctctctttggtgagagggcacaacagtgtgctcgggagcga
gaattgcggggcatgcagcgaggtttattttacgttggtgatgtggatttacacagactt
cgcgatgtggctcgaagtgaaatgggtctgcgcggtgagttccacaagaatgcacctatg
cttgtctttgatgcgggtttatgtgttcgcaaaagcgccaatgggaatttttccttgtct
tcgatgatttcgccatctgtttttgcacttagaaagaccgtctacggtcaattttcccag
acactctaa
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integrated database retrieval system
