Trypanosoma cruzi: 506009.80
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Entry
506009.80 CDS
T01012
Name
(RefSeq) DNA repair and transcription factor protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
tcr
Trypanosoma cruzi
Pathway
tcr03022
Basal transcription factors
tcr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tcr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
506009.80
09124 Replication and repair
03420 Nucleotide excision repair
506009.80
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcr03021
]
506009.80
03400 DNA repair and recombination proteins [BR:
tcr03400
]
506009.80
Transcription machinery [BR:
tcr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
506009.80
DNA repair and recombination proteins [BR:
tcr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
506009.80
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
3544367
NCBI-ProteinID:
XP_813043
UniProt:
Q4DF86
LinkDB
All DBs
AA seq
501 aa
AA seq
DB search
MNPSYFDQVLGYPEREGLMTQCPALALFCYQEFVAAIQGGKRVVDPLSAKDEVAVLLSAA
TVSEVTARVFATVEEGATLHPFWRTLRAALESAWDPVQGGDVHWRLYEVAGNARFYGKAM
PRMPLAQLSFQNTLDASRSILHMSTACALAGSIDPFGEKRGQPLASMLQYYRLVPTSSET
REITSEGLSFCMQPLQQQWWTLVSVALDRILVLTKNSGVTRAELWQLLAVLFALDTSQFV
YPFPEKEKDLAAFQILARLSEVGLVYPLISGGRRCFALSPHFHHAVCWSSTAPLCTAALL
DSGGNSMGRVRREDEDTIITEANFRLYAYTRNPDLLNILNQFAERDAEVDQMIACYRVTR
RTFAAALKRGIGSSHILQFLAVKAHPSMLRHHREGDSKKASGLSVLGAGTRFKNASDIRI
DEIIPQSFCDQLMTWEKECRRLIFSRNLVLLRNVTAVQKELLLNALSSGGERHAVVHQEK
GYLVVQREAYERVLAPLIPTE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaatccctcctattttgatcaggtgctgggctacccggagcgtgagggtctaatgaca
cagtgcccagctctcgcgcttttttgttatcaggaatttgttgccgcgattcagggtgga
aagcgagtggttgaccccttatctgcgaaggacgaggtggcggtgcttttgtcggccgca
acagtctctgaagtcaccgcgagagtgtttgctacggtagaggagggggcgactctccat
cccttttggcgcacccttcgagcagccttggagagcgcatgggatcctgtgcaggggggc
gatgttcactggcggctctacgaggtggcgggaaatgcccgattttacggaaaggcgatg
ccgcgaatgccgcttgctcagctctcttttcaaaacacgttggatgcgagtcgaagtatt
cttcacatgtcgacggcctgtgctctcgcaggatctattgacccgttcggagagaagcgg
gggcagccccttgcgtccatgttgcagtattatcgccttgtcccaacttcgtcagagacg
agggaaattacttctgaggggttgagtttttgcatgcaacccctgcagcagcaatggtgg
acgttggtctccgtggccctcgaccgcattttggtactgacaaaaaacagtggtgtgacg
cgtgccgaactgtggcaactattagccgttttgtttgctcttgataccagtcagtttgtt
tacccgttcccggaaaaggaaaaggatttggccgcctttcaaattctggcacgtctgtcg
gaggtggggcttgtgtatcctctcatttctggtggtcgtcgttgctttgcgctgtcgcct
cactttcatcatgcggtttgctggagctccacggccccgctctgcacagctgcgctgctt
gatagcggggggaactcgatgggtcgcgttcgccgcgaggatgaagacaccatcatcaca
gaggcgaactttcgcctctatgcttacacaagaaatcctgatcttttgaatattctcaat
cagtttgcggagagggatgcagaagtagaccagatgattgcttgttaccgagttacgcgg
aggacatttgctgcagctttaaagcggggtatcggctcttcgcacatcttacagtttctt
gcggtgaaggcacatccgtccatgttgaggcatcatagagagggtgattccaagaaagcg
tcgggcttatccgtcttgggtgctggaacacgtttcaaaaacgcttctgatatccgtatt
gacgaaatcattccacaatcgttttgcgaccagctgatgacgtgggagaaggagtgtcgg
cggcttatttttagtcgaaatcttgtactgcttcgaaacgttactgcggtgcagaaagag
ttgttgttgaacgctctttcctcgggcggcgagaggcacgcggtggtgcaccaggagaaa
ggctacttggtggtgcaacgtgaagcgtatgagcgtgtgttggctcctttgattcccaca
gagtaa
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integrated database retrieval system
