Trypanosoma cruzi: 508319.40 Help Entry 508319.40         CDS       T01012                                  Name (RefSeq) RNA helicase   KO K12812   ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] Organism tcr  Trypanosoma cruzi Pathway tcr03013   Nucleocytoplasmic transport tcr03015   mRNA surveillance pathway tcr03040   Spliceosome Brite KEGG Orthology (KO) [BR:tcr00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     508319.40   09122 Translation    03013 Nucleocytoplasmic transport     508319.40    03015 mRNA surveillance pathway     508319.40  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:tcr03019]     508319.40    03041 Spliceosome [BR:tcr03041]     508319.40 Enzymes [BR:tcr01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      508319.40 Messenger RNA biogenesis [BR:tcr03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     EJC complex      508319.40 Spliceosome [BR:tcr03041]  Complex C   Other components    EJC/TREX     508319.40  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     508319.40 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DEAD Helicase_C ResIII Cas3-like_C_2 P-loop_SecA CMS1 DUF4844 Motif Other DBs NCBI-GeneID:  3538341 NCBI-ProteinID:  XP_808002 UniProt:  Q4D0U9 LinkDB All DBs AA seq 436 aa AA seqDB search MSSGLADFDGDDVKVPIVSAQPHMGVGMGTHSAVALGGFQDFCLKSELANAIRENGFEHP SEVQHQALPQAMLGADILAQAKSGMGKTAVFVFALLEQIEKVPEGQKPHCQGIVVVHARE LAYQIEQEFKRFNKYLPYCTTGVFFGGIPEDENVKQLKKEVPAIVVGTPGRLSALIQRKA LDVSRVKWFVVDEFDRCLEDVKMRRDVQTVFLKTPKEKQVMMFSATMTDELRNVAKKFMN NPTEIYVDQRAKLTLHGLAQYYMNVTEAQKLRKLCDILDAVEFNQAIIFTSSVERCEALS RQLQALKFPAMAIHSRMEQPERLRVYESCKSNHTRIIVATDLFGRGVDIDRINLVVQFDM ASDADSCLHRVGRAGRFGTKGLTIAFLTDEEKEIKRENRKYTDHGVMKELQERFEMQVRE LTDISTQLNQSQYMNQ NT seq 1311 nt NT seq  +upstreamnt  +downstreamnt atgagcagtggacttgccgactttgacggagatgatgtgaaggtgccgattgtgtccgca cagccacatatgggtgtgggcatgggaacacacagtgccgttgccctgggagggtttcag gacttttgtctcaagagcgaactcgccaacgccatccgcgagaacggctttgagcaccca agcgaagtgcaacatcaggcattgccgcaggcgatgctcggcgctgacattcttgcgcag gccaagtccggtatggggaagacggctgtctttgtctttgcactgttggagcaaattgaa aaggtgccagaggggcagaagccgcattgtcagggaattgttgtcgtccacgcccgagag ttggcgtaccagatcgagcaggagttcaagcggtttaacaagtatttgccgtattgcacc actggtgtcttttttggtggaatcccagaggacgaaaacgtgaagcagctcaaaaaggaa gtccccgcgatagtggtgggaacaccggggcgcctcagcgcacttattcagcgcaaggct ctcgatgtgtcgcgcgtcaagtggtttgtcgtggatgagtttgaccgctgtttagaggat gtgaagatgcgccgtgatgtacagacggtattcctcaagacacccaaggagaagcaagtg atgatgttttccgctacaatgaccgatgaacttcgtaatgtggcgaagaagtttatgaac aacccaacggagatatatgtggatcaacgggcaaagcttacactgcatgggctcgcacag tattacatgaatgtcacggaggcgcagaagctccggaagctttgcgacattcttgatgct gtggaattcaatcaggctattatttttacatcctctgtggagcgttgcgaggcgctcagc cgtcagctgcaggctcttaagtttcctgcaatggccattcactctcgcatggaacagcct gagcgacttcgtgtgtatgagagctgcaaatcaaaccacacccgcattattgttgccacg gatctttttggtcgtggtgtcgacattgatcgtataaaccttgtggtgcagtttgatatg gcatccgatgcggattcatgccttcatcgcgtgggtcgtgcgggtcgctttggcacgaag ggcctgacgattgcctttctcaccgatgaggagaaggagattaaacgtgagaaccgcaag tacaccgatcacggcgtcatgaaggaactccaggagaggttcgagatgcaggtacgggag ctgacagacatcagcactcaacttaaccagagccagtacatgaatcagtaa

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