KEGG   Trypanosoma cruzi: 508355.104
Entry
508355.104        CDS       T01012                                 
Name
(RefSeq) hypothetical protein
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
tcr  Trypanosoma cruzi
Pathway
tcr03020  RNA polymerase
tcr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tcr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    508355.104
  09124 Replication and repair
   03420 Nucleotide excision repair
    508355.104
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tcr03021]
    508355.104
   03400 DNA repair and recombination proteins [BR:tcr03400]
    508355.104
Transcription machinery [BR:tcr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     508355.104
DNA repair and recombination proteins [BR:tcr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      508355.104
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L
Other DBs
NCBI-GeneID: 3553933
NCBI-ProteinID: XP_821132
UniProt: Q4E3C1
LinkDB
AA seq 133 aa
MMSIPHGMLIYNNDITADSLVDTKGTRKITEEISSKMPNSSLFKLDKEDHTLANLLRMKL
HEDALVHIAGYRVPHPTQHRVELRVQTSSDGSGRPIPSPKDALLKAIDACMQDLQSFEEQ
LRWEAQSKGISTE
NT seq 402 nt   +upstreamnt  +downstreamnt
atgatgtcaattcctcatggtatgttgatctacaacaatgatatcacagccgatagctta
gtagacaccaaaggcactcgcaagataaccgaggaaatctcaagcaagatgccaaattct
tcactctttaaactggataaggaggatcacacattagctaatcttctccgcatgaaactg
catgaggatgcgctggtgcatattgcgggctatcgtgttccccacccgacgcagcaccgc
gtagaacttcgtgtgcaaacttcatctgacggatcaggtcgccccattccttccccgaag
gatgctttattgaaggcgattgatgcatgcatgcaagatcttcaaagctttgaagagcaa
ctccgctgggaggcacagtcaaagggcatcagtacggaataa

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