Trypanosoma cruzi: 508817.70
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Entry
508817.70 CDS
T01012
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
tcr
Trypanosoma cruzi
Pathway
tcr03440
Homologous recombination
tcr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
508817.70
03450 Non-homologous end-joining
508817.70
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tcr03032
]
508817.70
03400 DNA repair and recombination proteins [BR:
tcr03400
]
508817.70
DNA replication proteins [BR:
tcr03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
508817.70
DNA repair and recombination proteins [BR:
tcr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
508817.70
BRCA1-C complex
508817.70
NHEJ (non-homologous end-joining)
MRX complex
508817.70
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
SbcC_Walker_B
AAA_15
ABC_tran
AAA_29
RsgA_GTPase
Rad50_zn_hook
Tox-MPTase2
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
3546455
NCBI-ProteinID:
XP_814845
UniProt:
Q4DKE4
LinkDB
All DBs
AA seq
1346 aa
AA seq
DB search
MTSIEQIQISGVRSFDPNPAHRQTIVFQKPLTVILGKNGAGKTTIIEALLNACTGQMPPG
SGSEKSSFVYDPKVMGETDVKAQIRLLFTGRGGKVMQVIRSFQALRTRTKTTFTTLDSTV
AFQDTATGKVLSSTYRANDVDRAVPEMLGVSPAVLEHVIFCHQEDANWPLLPPKEVKKIF
DEIFAATRYVLALDRLRENSKEFRRQQKEHEANLMALREHREQAQQLTGDIAAKEELVRT
IQQRSKSLEPQLKELHAVTAALSAVEQGAEGLAREAAMIQGRIDEKQESLSRMTLPPTTL
TIEEMLEFKQGFAERIKGLEADASDKANLLEKAEAKKQQCEETALRLRSTTEFLEQQERQ
YKENRVELQGIVKNLSTGLVLCDDDMCEEDLQRVSDHLNAELQLARAERDKALKEFDDEK
KLLEDQRNMLLRSMDADNKEKDMKEDQLKHLHQRVVSTEEALGKLKPYVGATYLESLKKT
ISELEQRLEVMEELKKKGENYKQRQDILQRIDAQNRIVAGLRQELARHKECLGGEAEMNL
LRTQITEKERFLEAEMRETLVPELSNFGHEMTEGSSLSQISLLIEQLREQKLGVLRAIQT
EHGELDRQIAVLQQNRAQRMEEIMRENSELQRKRTNCVKALDGLGEIDHFEAVLEKARDL
LEAARNRHHALEAMSTCYANFVQVARVEGKCPVCDRGFTDELSLANFVELNERHHGASPE
MIEKAHLEAKEAEERVRILETLEADVHDVRRLASSVPHLELLVTRTNEELANKSALLEDA
ERKREDVEHQLKRVQDLMRTAIDLNAVACDVRALRQQLSRREAAIKELQAEVVTAAGGGA
DGGARTYEEVSAEYESANTELHRLNVMLNEAQRREDGESDQAAASELNARRAEYYQLEMK
WMRQGELEEVLARYKGEENGYRERIAAINAGQEGVREELLRLQSRIDTLQRARQDAECAA
QQGRIGKIEESTQMLAGIVPKMRDYFASKHGEQLFRAREQMQLAEASRLRAVDEVRQLRE
AIQESRRVVDEQHRQAVEVGKHIEAFKKRQSIDEDQARLQEVERSLTEMKSREIRGVAAI
LGADVIAGETVSRIRELIREKVSELERSRAQQEGNVEAMMQDITNLRSQLAREKYHDIEK
RYRSTFLKVQTTEIAVADIEKYYRALEKAVQSYHQEKIAQINQILADLWRQTYKGSDIDT
VELRSEDDVTSTTARRSYSYRVVMKRGNSEMDMRGRCSAGQKVLASVLIRLALSEAFCCD
CGILALDEPTTNLDEDNARSLAESLRLLIENHRAVKHFQLIVITHDEQFVRALGGQALDT
FYYIRKDRDGAFSVIEERTFDQLFAA
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcattgagcagattcaaatcagcggtgtccgcagctttgaccccaacccggct
caccgtcagacaattgttttccagaagcctctcactgttatactcggaaagaatggcgcg
ggtaagacaacaattatcgaggcattactgaatgcctgcacgggacaaatgcctccgggt
agcggctctgagaaaagctcctttgtgtatgatcctaaggtgatgggcgagacggatgtc
aaggcgcagatccgtctccttttcaccgggagaggcggcaaggtgatgcaggtgatacgt
tcctttcaggctttgcgtactcgcaccaaaacaaccttcacgacgcttgacagcactgtg
gcatttcaggataccgcgaccggtaaggttttatctagcacttaccgcgccaacgatgtg
gaccgtgccgtgcctgaaatgttgggtgtctccccggcggttctagagcatgttatcttc
tgtcatcaagaggacgccaattggcctctgttgccgcccaaagaggtaaaaaaaatattt
gatgagatttttgcggcgactcgctatgtcttggccctcgatcgacttcgggagaatagc
aaagagttccgccgacagcaaaaggagcatgaggcgaacttgatggcgttacgagagcac
cgggagcaggcgcaacagctcacgggtgacattgcagcgaaggaggagttggtccgcaca
attcagcagcgatccaagtcgttggaaccgcaactgaaggaactacatgctgtcacggca
gcgctgagtgctgtggagcagggcgcggagggtttggcacgcgaggctgccatgattcaa
ggccgcatcgacgagaaacaagagtcattgagtcgaatgacccttcctccgacgacttta
acgatagaggagatgttggaatttaaacagggttttgctgagcgtatcaaaggcctcgag
gcagacgcatccgataaggcgaacctccttgagaaggctgaggcaaaaaagcagcaatgt
gaagaaacggcgctgcgtcttcgctccaccactgaatttcttgagcagcaggagcggcaa
tataaagaaaaccgtgtggagcttcagggaattgtcaagaacctctcgacaggacttgtc
ttgtgtgatgatgacatgtgcgaggaagacctgcagcgtgtgagcgatcacttgaatgcg
gaattacaactggcgagagcggaacgagacaaggcattgaaggagtttgatgacgagaag
aaactccttgaggatcaacggaacatgttgcttcgctcaatggatgccgataacaaggag
aaggatatgaaggaggaccaactaaaacacctacatcagcgcgttgtgagcaccgaggag
gcattgggaaagttgaagccgtatgttggagctacataccttgagtcactgaagaaaaca
atatccgaattggagcagcgtttggaggtaatggaagaattgaagaagaaaggggaaaat
tacaaacaacgacaagacatattgcagagaatagatgcacaaaatcgcattgttgcaggg
ttgcgtcaggaattggcgagacacaaggaatgcttgggtggtgaggcggagatgaatctt
cttcggacacagattacagagaaggagaggtttcttgaggccgagatgagggagacactc
gtgccggagttgtctaattttgggcacgagatgactgagggaagttccctgtcgcagatt
tccctcctcattgagcagctcagggaacaaaagctgggggtactccgagctattcaaacc
gagcacggtgagctcgatcgtcaaattgccgtgctacaacagaatcgggcgcagcgaatg
gaggaaataatgcgggaaaactccgagttgcagcggaagcgcacaaactgcgtgaaggca
cttgatggcttgggtgaaattgatcattttgaggctgtccttgagaaggcccgtgattta
ttagaagcagcgaggaacaggcatcatgcactggaggcaatgtcaacatgctacgcaaat
tttgtgcaggtggctagggtggagggaaaatgtcccgtgtgcgaccgcggttttacggat
gagttgtcgcttgccaactttgtggagctcaacgagcgacatcatggggcgtcaccagag
atgattgagaaggctcatttggaggcgaaagaagcagaggaaagggtgcgtattcttgaa
actctcgaggctgatgtgcatgacgtgagacgtctggcgtcgagcgttccacatctggag
ctgctggtgacacgtaccaatgaagagctggcgaacaagtctgccttgttggaggatgcg
gagcggaagcgggaggatgtggagcatcagttgaagcgtgtgcaagatttgatgcgcacg
gcgatcgatttaaatgcggtcgcttgtgatgtccgtgcactcaggcaacaactttcccgc
agggaagctgccatcaaggagctacaggcggaagtcgtgaccgcggctggtggtggtgct
gacggcggtgctcgaacatacgaagaggtttcggcggagtatgagagtgccaatacggag
cttcatcgtcttaatgtgatgctgaatgaggcacagcgacgtgaagatggtgagtctgac
caggcggctgccagtgagctcaacgcgaggcgggctgagtactaccagttggagatgaaa
tggatgcggcagggtgaactggaggaggtacttgcacgatacaagggtgaggaaaatggc
tacagggagcgcattgccgcaatcaacgctgggcaagagggagtgcgagaggagctcctg
cgtctacaaagtcgtattgacacccttcagcgggcgcgtcaggatgccgaatgcgccgcg
cagcaaggccgaattgggaaaatagaggaatcgacgcaaatgttggcggggattgtgccc
aagatgcgcgattactttgcgtctaagcatggggaacaattgttcagagcacgggaacaa
atgcaattggcagaggcatcgcgcctgagagccgtggatgaggtaagacagctgcgtgag
gcgatccaggagtcacgacgtgtggtggatgagcagcaccgtcaggcggtagaggtgggg
aagcacatcgaggcctttaagaagcgtcaatcgattgatgaggatcaggcacgactgcag
gaggtggagcgctctcttaccgaaatgaagagccgggagattcgtggagttgcggcaata
ttgggggcagatgtcattgcgggtgagacggtttcacgcatccgggagctcatccgcgaa
aaggtgagcgagttggagcgatcccgtgctcagcaggagggaaatgtggaggcaatgatg
caagacatcacaaacctccggagtcaactggcccgtgagaagtaccacgacatcgagaaa
cgataccgatccacctttttaaaggtccaaacaaccgaaattgccgttgcggatattgaa
aagtactacagggcattggagaaggcagtgcagtcttaccatcaggagaagattgcacag
atcaatcagattttggcggacctttggcgacagacgtacaagggaagtgacattgacacc
gtggaacttcgttccgaggatgatgtgacgtcgacaacggcgcgtcgtagttatagctac
cgcgttgtgatgaaacgagggaacagcgagatggacatgcgtggccggtgcagcgctggc
caaaaggtgttggcatccgtgcttattcgtcttgcacttagtgaggcgttctgctgtgac
tgcggcatccttgcgcttgatgaaccgacgacaaacctggacgaggacaacgcccggtcg
cttgcagagtctctccgtttgcttattgaaaaccaccgcgccgtgaaacattttcagttg
attgtcatcacacacgatgagcaatttgtgagggcactcggtggacaggcactggacacg
ttctactacattcgcaaggacagggacggcgctttttcagtcatcgaggagcgcaccttt
gatcagttgttcgcagcatga
DBGET
integrated database retrieval system
