KEGG   Trypanosoma cruzi: 510535.60
Entry
510535.60         CDS       T01012                                 
Name
(RefSeq) CCR4 associated factor
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
tcr  Trypanosoma cruzi
Pathway
tcr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tcr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    510535.60
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tcr03019]
    510535.60
Messenger RNA biogenesis [BR:tcr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     510535.60
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     510535.60
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 3543941
NCBI-ProteinID: XP_812690
UniProt: Q4DE88
LinkDB
AA seq 336 aa
MMQYGNALAQYGTYQQRYPVAVSQGGIAAIPSLSKSPMIRDVWEENLEEEFNIIRSLIKD
YPYVSMDTEFPGVVAKPVGNFKATHEFYYQTLRCNVNLLKMIQLGITLLNEKGEVPENCC
TWQFNFRFCLTEDVYAQDSIQLLRHGGIDFDYFAQYGVEVTHFAELLISSGLVLNSDIRW
LAFHAGYDFGYLMKVVCGKELPEKEDDFLQIFHSLFPCVYDIKYLLRATDLSHSLGLDHL
SESLRVRRFGMAHQAGSDSLLTGHCYFKLLRDCFGSNPPVASNGVLYGLCEDASSAATPS
STTIPGGSAHAFASFTASKNTTFPSTPLNHSVKGHN
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgatgcagtacggtaacgctttagcgcaatacgggacgtaccagcagcgttatccggtt
gctgttagccaaggcgggattgctgccattccttcccttagtaaatccccaatgattcgc
gacgtgtgggaggagaatttagaggaagagttcaacatcatacgatccctgatcaaagat
tacccttatgtgtcaatggacaccgagtttcccggagttgtagcgaagcctgtgggcaat
tttaaggcaacacacgagttttattaccagacacttcgttgtaatgtcaatttgctcaaa
atgattcagctagggattacactactcaatgaaaagggtgaggtaccggaaaactgctgc
acctggcagtttaacttccgtttttgcctcacagaggatgtgtacgcacaggatagtatt
cagttactccgccatggcggcattgactttgactactttgcgcagtatggggttgaggtg
acgcactttgcggagctccttatctcgagcgggcttgtgctgaacagcgacattcgctgg
cttgcctttcatgcaggctacgactttggttatttgatgaaggtggtctgcggcaaggaa
ctgccggagaaggaggatgacttcctgcagatcttccactccctgttcccgtgcgtgtac
gacatcaagtacctcctgcgcgccaccgacctctcgcactcgttgggtttagaccacctc
tcggagagccttcgggtgcgccggttcggcatggcgcaccaggccggcagcgactccctc
ctcaccggccactgctacttcaaactgctccgcgactgcttcggcagcaacccgcccgtg
gcaagcaacggcgtgctctacggcctgtgcgaagacgcgtcctcagccgccacgcccagc
agcacgacgataccgggcggcagcgcacacgcgttcgcctcgtttaccgccagcaaaaac
accacattcccgtccacgccgctcaaccactcggtgaagggccacaactaa

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