Trypanosoma cruzi: 511139.40
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Entry
511139.40 CDS
T01012
Name
(RefSeq) RNA helicase
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
tcr
Trypanosoma cruzi
Pathway
tcr03013
Nucleocytoplasmic transport
tcr03015
mRNA surveillance pathway
tcr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
511139.40
09122 Translation
03013 Nucleocytoplasmic transport
511139.40
03015 mRNA surveillance pathway
511139.40
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcr03019
]
511139.40
03041 Spliceosome [BR:
tcr03041
]
511139.40
Enzymes [BR:
tcr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
511139.40
Messenger RNA biogenesis [BR:
tcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
511139.40
Spliceosome [BR:
tcr03041
]
Complex C
Other components
EJC/TREX
511139.40
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
511139.40
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
3534271
NCBI-ProteinID:
XP_804732
UniProt:
Q4CRH7
LinkDB
All DBs
AA seq
131 aa
AA seq
DB search
LKFPAMAIHSRMEQPERLRVYESCKSNHTRIIVATDLFGRGVDIDRINLVVQFDMASDAD
SCLHRVGRAGRFGTKGLTIAFLTDEEKEIKRENRKYTDHGVMKELQERFEMQVRELTDIS
TQLNQSQYMNQ
NT seq
397 nt
NT seq
+upstream
nt +downstream
nt
tcttaagtttcctgcaatggccattcactctcgcatggaacagcctgagcgacttcgtgt
atatgagagctgcaaatcaaaccacacccgcattattgttgccacggatctttttggtcg
tggtgtcgacattgatcgtataaaccttgtggtgcagtttgatatggcatccgatgcgga
ttcatgccttcatcgcgtgggtcgtgcgggtcgctttggcacgaagggcctgacgattgc
ctttctcaccgatgaggagaaggagattaaacgtgagaaccgcaagtacaccgatcacgg
cgtcatgaaggaactccaggagaggtttgagatgcaggtacgggagctgactgacatcag
cactcaacttaaccagagccaatacatgaatcagtaa
DBGET
integrated database retrieval system
