KEGG   Trypanosoma cruzi: 511153.130
Entry
511153.130        CDS       T01012                                 
Name
(RefSeq) DNA-direcetd RNA polymerase II, subunit 9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
tcr  Trypanosoma cruzi
Pathway
tcr03020  RNA polymerase
tcr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tcr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    511153.130
  09124 Replication and repair
   03420 Nucleotide excision repair
    511153.130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tcr03021]
    511153.130
   03400 DNA repair and recombination proteins [BR:tcr03400]
    511153.130
Transcription machinery [BR:tcr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     511153.130
DNA repair and recombination proteins [BR:tcr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      511153.130
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS zf-Sec23_Sec24 Zn_ribbon_12
Other DBs
NCBI-GeneID: 3545219
NCBI-ProteinID: XP_813769
UniProt: Q4DHB0
LinkDB
AA seq 133 aa
MQVSLTHLDDAPMLFCERCNNLLYPENDPLDRQMRWRCNYCRTTEVHDENKLVYILNLKL
KTGTTEELELLAEFANDPTAQRDPTKRCRRCGENDVTCFVNPLGQPHEDMTLYFACANPK
CRHVWKSGESQEQ
NT seq 402 nt   +upstreamnt  +downstreamnt
atgcaggtgtctctgacacacttggatgatgcgcccatgctcttttgcgagcggtgcaac
aacctcctctatccggaaaacgaccctttggataggcagatgaggtggcgatgcaactac
tgcaggacaactgaggtgcatgacgagaataaacttgtgtatattctaaacctcaagtta
aagacggggacaacggaggaactggagttgttagcggaatttgcgaacgaccccaccgcc
caacgtgaccccacgaagcgatgccgccgctgcggtgagaatgacgtgacgtgctttgtg
aatcccctcggtcagcctcatgaagacatgactctctactttgcctgcgcgaatccaaaa
tgtcgtcacgtttggaagagcggtgaaagccaagagcagtaa

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