KEGG   Trypanosoma cruzi: 511589.160
Entry
511589.160        CDS       T01012                                 
Name
(RefSeq) replication factor C, subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
tcr  Trypanosoma cruzi
Pathway
tcr03030  DNA replication
tcr03410  Base excision repair
tcr03420  Nucleotide excision repair
tcr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tcr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    511589.160
   03410 Base excision repair
    511589.160
   03420 Nucleotide excision repair
    511589.160
   03430 Mismatch repair
    511589.160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tcr03032]
    511589.160
   03036 Chromosome and associated proteins [BR:tcr03036]
    511589.160
   03400 DNA repair and recombination proteins [BR:tcr03400]
    511589.160
DNA replication proteins [BR:tcr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    511589.160
  DNA Replication Termination Factors
   ELG1-RFC complex
    511589.160
Chromosome and associated proteins [BR:tcr03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    511589.160
DNA repair and recombination proteins [BR:tcr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     511589.160
  Check point factors
   HRAD17(Rad24)-RFC complex
    511589.160
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 Rad17 AAA_16 AAA_30 AAA_19 AAA_24 AAA_11 Mg_chelatase RCF1-5-like_lid AAA_14 RuvB_N DEAD AAA_assoc_2 AAA_25 AAA_5 KTI12 ABC_tran SLFN-g3_helicase nSTAND3 DNAX_ATPase_lid AAA_18 SRP54 RNA_helicase DUF3834 AAA_28 NTPase_1 AAA_33
Other DBs
NCBI-GeneID: 3547843
NCBI-ProteinID: XP_816018
UniProt: Q4DNR1
LinkDB
AA seq 340 aa
MSQQLVPWVEKYRPKSMEDIVGNADAVSRLRVISKEGNLPNLLLCGPPGTGKTTSVLCLA
RTLLSDQDGGDTTALKEAVLELNASDDRGLDVVREKIKLFAQTKKTLPQKVNESSQQKIN
LHKIVILDEADSMTPAAQQALRRTMELHSSTTRFAFACNNSHKIIEPIQSRCAVVRFKKL
THADILKRLTYIIQQENVTYTDDGLEALLYLAEGDLRSAVNALQATHSGYGMVNAENVFK
VCDQPHPLLVESIMDGCLQKKDLPSAHKELQRLLGRGYAASDVISTFFRTAQNPKLFRNE
QQQLAVLRIIGETTMRIAEGVGTPLQLASMLARITMVNTD
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgtcccagcagttagtgccgtgggtggagaagtaccgcccaaagtcgatggaagacatt
gtcggcaacgccgatgccgtttcgcgcctgcgggtgatatcgaaggagggaaatctcccg
aatctgctgttgtgcggcccgccagggaccggcaagaccacgagtgtgctttgcctcgcc
cgcacgctgctcagcgaccaggacggcggcgacacgaccgccctcaaggaggcagtgctg
gagcttaacgccagcgacgaccgtggactggacgtggtgcgggagaagataaaactgttt
gcgcagacgaagaagacgctgccgcagaaggtgaacgaaagcagccagcagaaaataaat
ctccacaaaattgtcattttggacgaggcggacagcatgacgccggcggcccaacaggcc
ttgcgccgcaccatggagcttcactccagcaccacacgctttgcttttgcctgcaacaac
agtcataaaataattgagcccattcagtctcgatgcgctgtggtgcgcttcaagaagctt
acgcatgcggacatattgaagcggctcacgtacattattcagcaggagaacgtcacttac
accgatgacgggttagaggctttgctgtacttggcagagggcgaccttcgttccgctgtg
aatgcccttcaggcaacgcactcgggctatggcatggtgaacgcggagaatgtctttaaa
gtttgcgatcagccgcatcccctgctcgtggagagcattatggatggctgtctccagaag
aaggatttgccgagtgcacacaaggagctgcagcggcttttaggccgtggctacgcggct
tcagatgtcatctccacctttttcaggacggcacagaatccgaagttgttccgcaacgag
cagcagcaactggcagtgctgcgcatcattggggagacaaccatgcggattgcggagggc
gttggcacaccgctgcagcttgcctcgatgctggctcgaatcacaatggtcaacacggac
tga

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