Thermosphaera chiliense: IMZ38_00775
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Entry
IMZ38_00775 CDS
T10865
Name
(GenBank) exosome complex exonuclease Rrp41
KO
K11600
exosome complex component RRP41
Organism
tcs Thermosphaera chiliense
Pathway
tcs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tcs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IMZ38_00775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcs03019
]
IMZ38_00775
Messenger RNA biogenesis [BR:
tcs03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
IMZ38_00775
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
IMZ38_00775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
QOR95061
UniProt:
A0A7M1US98
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All DBs
Position
124721..125452
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AA seq
243 aa
AA seq
DB search
MSSKPRLLREDGTRLDGRRLDELRPVKIRVGVLKNANGSALVEYGGTKVLAAVFGPREAL
PRHIALPDRATLRVRYHMAPFSTSERKSPAPSRREIELSKVIREALESVVFSEQFPRTSI
DIFIEVLQADGGTRTAGLTAASIALADAGIPMKDLVIGVAVGKIEGSLALDINELEDEYG
EADLPVGIAPNIGEILLLQLNGVLTPEELKAGIELAWRGVESIYKVAKEALYAKYIKAFE
EVK
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcaagcctaggttgctcagggaggatggcacgaggctggatggtaggcggctg
gacgagctgcggcccgtgaagatcagggtaggggttttgaagaacgctaacggaagcgct
ctcgtcgagtacggggggactaaggtgctggcagcggtctttggcccgagggaggctttg
ccgaggcatatagctctgccggatagggcaacgctgagggttagataccacatggccccg
ttctccacgagcgagaggaagtcgccagctccctcaaggagggagatagagctctccaag
gttatcagggaggctctcgaatcagttgtcttctcggagcagttcccgagaacatctatc
gacatattcattgaggttttacaagcagacggaggcaccaggaccgcggggttgaccgct
gcctcaatagctctagcagatgccggcatacctatgaaggacctggtaataggtgttgcg
gtcgggaagattgagggaagccttgcactagatatcaacgagctcgaggacgagtatggc
gaggcagacctgcccgttgggatagccccgaatattggggaaatcctgcttctccagctg
aacggtgtcttaacacccgaggagcttaaagcagggatcgagcttgcgtggagaggtgtt
gaatccatttacaaggttgctaaggaagccctctacgctaagtacattaaggctttcgag
gaggtgaagtag
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integrated database retrieval system
