KEGG   Thermosphaera chiliense: IMZ38_01780
Entry
IMZ38_01780       CDS       T10865                                 
Name
(GenBank) RtcB family protein
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
tcs  Thermosphaera chiliense
Brite
KEGG Orthology (KO) [BR:tcs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tcs03016]
    IMZ38_01780
Enzymes [BR:tcs01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     IMZ38_01780
Transfer RNA biogenesis [BR:tcs03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    IMZ38_01780
 Prokaryotic type
   tRNA splicing ligases
    IMZ38_01780
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: QOR94690
UniProt: A0A7M1UR10
LinkDB
Position
complement(305203..306651)
AA seq 482 aa
MVSVRVEKIGDYEWVIPRGAKPCMLTDALVFADEYLIKKMHEDLTLEQAANVACLPGIRL
KSYVMPDGHQGYGFPIGGVAGFDMEEGVISPGGVGYDINCGVRVLRTEMDEEDVRPRLKE
IVEALFRNVPSGVGSTGHLRLSVSDLDEVLNHGVKWAVEHGFGWERDMEHIEERGSMRDA
DASKVSRVAKQRGHEQLGTLGAGNHFLEIQVVDEIYDPEAAKTLGITRVGQVTLMIHTGS
RGLGHQVASDYLVTMERAMRKYGIQVPDRELAAVPFNSPEGQDYFKAMAAAANFAWTNRQ
IITHWVRESFKQVFKKPPEELGLEIIYDVAHNIAKKEEHVVNGEKYRVVVHRKGATRAFP
PGHPDIPADYRSIGQPVLIPGSMGTASYILVGTAQGARTWFSAPHGAGRWLSRGEAIRSY
SPEKITEELARKGVVLRAATKRVISEEAPGAYKDVDKVVLTAHKVGIARMVVRMRPIGVV
KG
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggttagtgttagagttgagaagataggggattatgaatgggttatccctagaggagct
aagccgtgcatgctcaccgatgccttggtgttcgctgacgagtacttgattaagaagatg
catgaggatttaaccctggagcaggctgctaacgtggcatgcctccccgggatcaggctg
aagtcttacgtgatgcctgacgggcaccagggctacgggttcccaataggcggcgtggcg
gggttcgacatggaggagggtgtgataagccctggtggagtaggctacgatataaactgc
ggggtcagggtgttgaggactgagatggatgaggaggatgtgaggccgaggcttaaagag
attgtggaggcgttgttcaggaacgtgccaagcggtgttggctcaacagggcatttaagg
cttagcgtgagcgacctggacgaggttttaaaccacggtgttaaatgggcggtggagcac
gggttcggatgggaaagggatatggagcatattgaggaaagagggagcatgagggatgcc
gacgcgagcaaggtcagcagggttgctaagcagagggggcatgagcagcttggaacactc
ggagctggaaaccacttcctcgaaatacaggtggttgacgagatctacgaccccgaggct
gctaaaaccctgggtataacccgggtggggcaggtaaccctcatgatccacaccgggagc
agggggctgggccaccaggttgcgagcgactacctggtaaccatggagagggctatgagg
aagtacgggatacaggtccctgacagggagcttgccgcagtacccttcaactcgcccgag
ggccaggactacttcaaagctatggccgcggccgcgaacttcgcctggactaacaggcag
atcataacccactgggttagggagagcttcaagcaggttttcaagaagcccccggaggag
ctgggtctcgaaataatatacgacgtagcccacaatatagctaagaaggaggagcacgtg
gtcaacggggagaagtacagggttgtagtccacaggaagggggccacgagggccttcccg
ccgggacaccccgacatacccgcggactacaggagcataggccagcccgtattaatacct
ggtagcatgggcacggccagctacatactggttgggacagcccagggggcgaggacatgg
ttcagcgccccgcacggagcgggcaggtggctgagcaggggtgaggcgataagatcctac
agccctgagaaaataaccgaggagcttgcgaggaagggtgttgtgctgagggctgcgact
aaaagagtgatcagtgaggaagcccccggagcctacaaggacgtggacaaggtggtgttg
acagcgcacaaggtagggattgctagaatggttgtaaggatgcgcccaataggagttgtt
aaaggatag

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