Pseudoduganella chitinolytica: PX653_00805
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Entry
PX653_00805 CDS
T08857
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tct
Pseudoduganella chitinolytica
Pathway
tct03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PX653_00805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tct03019
]
PX653_00805
03400 DNA repair and recombination proteins [BR:
tct03400
]
PX653_00805
Enzymes [BR:
tct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PX653_00805
Messenger RNA biogenesis [BR:
tct03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PX653_00805
DNA repair and recombination proteins [BR:
tct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PX653_00805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Cas3-like_C_2
AAA_30
AAA_25
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
WEF33365
LinkDB
All DBs
Position
184522..186225
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AA seq
567 aa
AA seq
DB search
MVTRNLSAAEKRAAVRIGTARARLIRNLLHNVFGVDQLRDGQRRVIDSVLEGNDTLAIMP
TGSGKSLCYQIPASIFKGTTIVVSPLISLMKDQLEKLEEIGIGAAQLNSSLSREEELDAL
DSIRNNLSNIVFCTPERLATPEFLEVLKDTEIALLVIDEAHCISQWGHDFRPAYLEIGAA
RRALDNPPVLALTATATPDVIDDIGRQLGARMHVVNTGIYRPNLRYRVIQITNPAEKTAE
AMRLVRETEGVGIIYAATVKAAEEMYEALEQAAESVALYHGKLPARERKENQDLFMNGER
RVMVATNAFGMGIDKSDTRFVIHLQVPANLEAYYQESGRAGRDGADAECTLLYFQDDKRL
QQFFLVKHYPSADELRAVYDTVVPLVPCQASVIADALPDMADSKLKVCLKLLKDGKLLRQ
NRKLDYLLTNKDASAVIFDQLSAIYQHKQERDREALEQMVGYAQSGYCRWKLMLDYFNDA
SAEVEHCGCCDNCVSPPSVQVEEGEAVLFEPPPEPSVPPGPVIAVGSQVKVPKFDIGTVL
SVAGDQITIEFPENTTKTFMAEFVQPV
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggtaacccgaaatctctccgcagccgagaagcgcgccgccgtgcgcatcggcaccgcg
cgtgcgcgcctgatccgcaacctgctgcacaacgtgttcggcgtggaccagctgcgcgac
ggccagcgccgcgtcatcgacagcgtgctggaagggaatgacacgctggcgatcatgccc
accggcagcggcaagtcgctctgctaccagattcccgcgtcgatcttcaagggcacgacg
atcgtggtctcgccgttgatctcgctgatgaaggaccagctggaaaaactggaggagatc
ggcatcggcgcggcgcagctcaacagcagcctgtcgcgcgaggaggagctcgatgcgctg
gacagcatccgcaacaacctcagcaacatcgtgttctgcacgccggagcgcctggccacg
ccggagttcctggaagtgctgaaggataccgagatcgcgctgctcgtcatcgacgaggcc
cactgcatctcgcagtggggccacgacttccgcccggcctacctggagatcggcgccgcc
cggcgggcgctggacaatccccccgtgctggcgctgacggcaacggccacgccggacgtc
atcgacgacatcggccgccagctgggcgcgcgcatgcacgtcgtcaatacgggcatctac
cggcccaacctgcgctaccgcgtcatccagatcaccaatcccgccgagaagaccgccgag
gccatgcggctcgtgcgcgagaccgagggcgtgggcatcatctacgccgccaccgtcaag
gcggccgaggagatgtacgaagcactggagcaggccgccgaaagcgtggcgctgtatcac
ggcaagctgccggcgcgcgaacgcaaggaaaaccaggacctgttcatgaacggcgagcgc
cgcgtgatggtggcgaccaatgcgttcggcatgggtatcgacaagagcgacacccgcttc
gtcatccacctgcaggtaccggccaacctggaagcctattaccaggagtccggccgtgcc
gggcgcgatggcgcggatgccgaatgcacgctcctgtacttccaggacgacaagcggctg
cagcagttcttcctcgtcaagcattacccgtcggcggacgagctgcgcgcggtctacgat
accgtggtgccgctggtgccgtgccaggccagcgtcattgcggatgcgctgccggacatg
gccgacagcaagctgaaagtctgcctgaagctgctcaaggacggcaagctgctgcgccag
aaccgcaagctggactacctgctgaccaacaaggacgccagcgcggtcattttcgaccag
ctgtcggcgatctaccagcacaagcaggagcgcgaccgcgaggcgctggagcagatggtg
gggtatgcgcagagcggctactgccgctggaagctgatgctggactatttcaacgacgct
tccgccgaagtcgagcactgcggctgttgcgacaactgcgtctcgccgccatcggtgcag
gtggaggagggcgaggccgtgctgttcgagccgccgccggaaccgtccgtcccccctggc
cccgtgatcgcggtgggcagccaggtcaaggtgccgaagttcgacatcggcacggtgctc
tccgtggccggcgaccagatcaccatcgagttccccgagaatacgacgaagaccttcatg
gcggagttcgtgcagccggtgtga
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