Pseudoduganella chitinolytica: PX653_03180
Help
Entry
PX653_03180 CDS
T08857
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
tct
Pseudoduganella chitinolytica
Brite
KEGG Orthology (KO) [BR:
tct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tct03009
]
PX653_03180 (dbpA)
Enzymes [BR:
tct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PX653_03180 (dbpA)
Ribosome biogenesis [BR:
tct03009
]
Prokaryotic type
rRNA helicases
PX653_03180 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
P-loop_SecA
PAS_12
Motif
Other DBs
NCBI-ProteinID:
WEF33800
LinkDB
All DBs
Position
complement(698480..699892)
Genome browser
AA seq
470 aa
AA seq
DB search
MTATAFATLPLTDSFLANLDSLGYKTMTPIQAQSLPAVLEGRDLIAQAKTGSGKTAAFGI
GLLHKLNPAWFATQALVLCPTRELADQVANELRRLARSVGNVKVLVLTGGAPMRPQIASL
EHGAHVVVGTPGRIRDHIGRKTIDLSTVQTLVLDEADRMTDMGFYDEIAGIVSACPKRRQ
TLLFSATYPDDIRVATEAFLADPVEVTVEAQHDSSKIVQRFYEIGFDERDAAVGKLLKHY
KPASAIVFCNTKVHCRELVDELRAQGFSALALYGELEQRERDEILVLFANRSCSILIATD
VAARGLDIQNLEAVINADVSKDTEVHIHRIGRTGRGDERGLSLTLCAPNEKKWVKLIEEY
QGAPVEWHSLKDLDDDEYAQGDAAPMMTLCILGGKKDKLRPGDVLGALTGDAGLVKEQVG
KINVTEFQTYVAIDRRVAYDAFAKLNAASRQGGDFGSFKGRNFKMRFIEV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccaccgccttcgccaccttgcccctgaccgactccttcctcgcgaacctcgat
tcgctgggctacaagaccatgacgccgatccaggcccagagcctgcccgccgtgctggaa
gggcgcgacctgatcgcccaggccaagacgggcagcggcaagaccgcggcgttcggcatc
ggcctgctgcacaagctcaacccggcgtggttcgccacccaggcgctggtgctgtgcccc
acccgcgagctggccgaccaggtggcgaacgaattgcgccggctggcgcgcagcgtcggc
aatgtcaaggtgctggtgctgacgggcggcgcgccgatgcgcccgcagatcgcttcgctg
gagcatggcgcccacgtcgtcgtcggcacgcccggccgcatccgcgaccacatcggccgc
aagacgatcgacctgtccaccgtgcagacgctcgtgctggacgaggcggaccgcatgacg
gacatgggcttctacgacgagatcgcgggcatcgtcagcgcctgcccgaagcggcgccag
accttgctgttctcggccacgtatccggacgatatccgcgtcgcgaccgaagccttcctg
gccgacccggtcgaggtgacggtggaggcccagcacgacagcagcaagatcgtgcagcgc
ttctacgagatcggcttcgacgagcgcgacgccgccgtcggcaagctgctcaaacactac
aagcccgcgtcggccatcgtgttctgcaacaccaaggtgcactgccgcgagctggtggac
gaactgcgcgcgcagggcttctcggcgctggcgctgtacggcgaactggaacagcgcgag
cgcgacgagatcctggtgctgttcgccaaccgcagctgctcgatcctgatcgccaccgac
gtggccgcgcgcggcctggacatccagaacctggaagcggtgatcaacgcggacgtctcg
aaggacacggaagtgcacatccaccgcatcggccgcaccggccgcggcgacgagcgcggc
ctgtcgctgacgctgtgcgcacccaacgagaagaaatgggtcaagctgatcgaggagtac
cagggcgcgcccgtcgaatggcactcgctcaaggatctggacgacgacgagtatgcgcag
ggcgacgcggcgccgatgatgacgctgtgcatcctgggcggcaagaaggacaagctgcgt
cccggcgacgtgctgggcgcgctgacgggcgacgccgggctggtaaaggagcaggtcggc
aagatcaacgtgaccgaattccagacctacgtcgccatcgaccggcgcgtggcctacgac
gcgttcgccaagctgaacgcggccagccgccagggcggcgacttcggcagcttcaaggga
cgcaacttcaagatgcggtttatcgaggtgtaa
DBGET
integrated database retrieval system
