Pseudoduganella chitinolytica: PX653_03220
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Entry
PX653_03220 CDS
T08857
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
tct
Pseudoduganella chitinolytica
Brite
KEGG Orthology (KO) [BR:
tct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tct03400
]
PX653_03220
DNA repair and recombination proteins [BR:
tct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PX653_03220
Archaeal homologous recombinant proteins
PX653_03220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
WEF33807
LinkDB
All DBs
Position
complement(709074..710312)
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AA seq
412 aa
AA seq
DB search
MRLLHTSDWHLGQSLHNFDRHYEHQCFLDWLLETIEAEQADALLIAGDVFDNANPSAASQ
RQLYRFLQQARARAPGLDIVVTAGNHDSPGRIEAPGPLLEAHGTQVIGHVQRDGDGTIDI
GRMVVPLTNRAGAVAAWCLAVPFLRPADVPRAGQEGAEAVDGYLAGIAELYAQAQAHALA
LRQPGQAIVAMGHCHMVDGQMSADSERRIVIGGTEMLPAGMFGADVAYAALGHLHLAQQI
GRHGHIRYSGSPIPLSFSEVHYQHQVLRIDLDGGALQDVVPIPVPRAVHLLRVPSRPAPL
AQVLDELEALDFPPAPAYAQPFVEVRVLLDAPEPGLRSRIEAALEGKHVRLAKIDTASAA
RGPSLVDAAVSLDQLAQLQPDEVFARLYRQKYGNEAPPDQVAAFAELLLAGV
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgctgcacacctcggactggcacctcggccagtcgctccacaacttcgaccgc
cactatgaacaccagtgcttcctggactggctgctcgagacgatcgaggcagaacaggcc
gatgcgctcttgatcgcgggcgacgtgttcgacaacgccaacccgtcggccgcctcgcag
cgccagctgtaccgcttcctgcagcaggcccgcgcgcgcgcgcccggcctggacatcgtc
gtcacggccggcaaccacgattcgcccggccgcatcgaggcaccggggcccctgctggaa
gcgcacgggacccaggtgatcggccacgtgcagcgcgatggcgacggcacgatcgatatc
ggccgcatggtcgtgccgctgacgaaccgcgccggcgccgtggcggcatggtgcctggcg
gtgccgttcctgcgcccggccgacgtgccgcgcgcggggcaggaaggcgcggaggcggtg
gacggctacctggccggcatcgccgagctgtacgcgcaggcacaggcccacgcgctggcg
ctgcgccagccgggccaggccatcgtcgcgatgggccattgccacatggtggacgggcag
atgtcggccgactcggagcgccgcatcgtcatcggcggcaccgagatgctgccggccggg
atgttcggggccgacgtcgcctacgccgcgctgggccacctgcatttggcgcagcagatc
ggccggcatggccacatccgctacagcggcagcccgatcccgctgtcgttctcggaagtg
cactaccagcaccaggtgctgcgcatcgacctcgatggcggcgcgctgcaggacgtggtg
ccgatccccgtgccgcgcgccgtgcacctgctgcgggtgccgtcccgccccgccccgctg
gcgcaggtgctggacgaactggaagcgctggacttcccgcccgcgccggcctacgcgcag
ccgttcgtcgaagtgcgcgtgctgctcgatgcgcccgaaccgggcctgcgttcgcgcatc
gaggcggcgctcgaaggcaaacacgtgcgcctggcgaagatcgacacggccagcgccgcg
cgcggcccttcgctggtggacgccgccgtctcgctggaccagctggcgcagctgcagccg
gacgaggtgttcgcgcggctgtaccgccagaagtacggcaacgaggcgccgcccgaccag
gtggccgcgtttgccgaactgctgctggcgggagtgtag
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