Pseudoduganella chitinolytica: PX653_03440
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Entry
PX653_03440 CDS
T08857
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
tct
Pseudoduganella chitinolytica
Pathway
tct03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tct00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PX653_03440 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tct03019
]
PX653_03440 (rnc)
03009 Ribosome biogenesis [BR:
tct03009
]
PX653_03440 (rnc)
03036 Chromosome and associated proteins [BR:
tct03036
]
PX653_03440 (rnc)
Enzymes [BR:
tct01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PX653_03440 (rnc)
Messenger RNA biogenesis [BR:
tct03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PX653_03440 (rnc)
Ribosome biogenesis [BR:
tct03009
]
Eukaryotic type
90S particles
RNase
PX653_03440 (rnc)
Prokaryotic type
rRNA processing factors
PX653_03440 (rnc)
Chromosome and associated proteins [BR:
tct03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PX653_03440 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
WEF33849
UniProt:
A0ABY8BHT9
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All DBs
Position
757402..758190
Genome browser
AA seq
262 aa
AA seq
DB search
MNLQLLQTRLGHTFKDAGLLQQALTHRSHSSLHNERLEFLGDSILNCVVASILYERYHAI
DEGDLSRLRANLVKQQSLYEIAQKLDLSQFLRLGEGELKSGGFRRPSILADTLEALLGAI
FLDAGFDAAAMVIRAFYIPILDSVDPRTLGKDAKTLLQEFLQSKKISLPLYNVVATHGAA
HSQEFEIECLVPKLGIQVYGRGGSRRAGEQAAAKLALEVAEQALLKAPPAARKSKPRAAQ
LKLAGIATVQNDQTADAKLANK
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaatttacagttattgcagacccggctgggccacacgttcaaggatgccggcttgctt
cagcaggccctgacgcatcgcagccacagcagtctgcataacgaacgcctggagttcctg
ggcgactcgatcctcaactgcgtggtcgcgtcgatcctgtatgagcgttaccatgcgatc
gacgaaggcgacctgtcgcgcctgcgcgccaacctcgtcaagcagcagtccttgtacgag
atcgcccagaagctggacctgtcgcagttcctgcgcctgggcgagggcgaactgaagtcg
ggcggcttccgccggccgtcgatcctggccgatacgctcgaagcgttgctgggcgcgatc
ttcctggacgcgggcttcgatgccgccgccatggtgatccgggcgttctacatcccgatc
ctggactcggttgatccgcgcaccttgggcaaggacgccaagacgttgctgcaggaattc
ctgcaaagtaagaagatttcgctgccgctgtacaatgtggtcgccacgcacggcgccgcg
cacagccaggagtttgaaatcgaatgcctggtgcccaagctgggcatccaggtctacggc
cggggcggcagccgccgtgccggcgaacaggccgcggccaagctggcgctggaagtggcc
gagcaggcgctgctgaaagcaccgccggcggcccgcaaatcgaagccccgcgccgcccag
ctgaagctggcgggcatcgccacggtccagaacgaccagacggcggacgccaagctcgcc
aacaaataa
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