KEGG   Pseudoduganella chitinolytica: PX653_05485
Entry
PX653_05485       CDS       T08857                                 
Symbol
tssI
Name
(GenBank) type VI secretion system tip protein TssI/VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
tct  Pseudoduganella chitinolytica
Pathway
tct03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:tct00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PX653_05485 (tssI)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tct02044]
    PX653_05485 (tssI)
Secretion system [BR:tct02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PX653_05485 (tssI)
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V Gp5_C DUF6484 DUF2345 Stirrup
Other DBs
NCBI-ProteinID: WEF34223
UniProt: A0ABY8BFR1
LinkDB
Position
1237662..1239707
AA seq 681 aa
MQPTQANRPVTVTSALGADVLLFRRMQCSEALGQLFEFRVQLESSRADIATADVLGQPLT
VTLDLEEGGERHFHGIVTRFAYLGWRDGMPAWEAIVHPALWLLTRSSDCRIFQDKTALEI
VKAVCGDGCYGGLIKIDAGKLSSTPAKREFCVQYRESDFDFVSRLLEEEGIYYYFRHEAG
AHTMVLADGYGAHASAAGYATLPFWDEQEGRRAPGKAVSRMWPAGAVQSGEYALNDYDFE
QPAAIRNAGLLVKSAIAAPYTAQRFRQYDYPGRYKAAGAGESRARARMEALHGQGEQVDG
ATNARGIGAGALFKLAEHPRADQNREFLVTATAIEFASSAYGSGGTQGAFEFQCSFQAVG
KEHSYRPPRSAARPFVHGPQTAIVVGKAGEETWTDKHGRIKVQFHWERERHDDDTSSCWV
RVQQGWAGKGWGTMFIPRIGMEVVVSFLEGDPDQPLVTGCVYNADTVVPYDLPAHQTRST
IKTNSSKGGGGYNELRFEDKKGAEELYIQAEKDCNRVVKNNDTLKVGFEKKDKGDQTIAI
CHDQSIDVGNDRKVHVVNDETVTVDANQKLDVGKDRSVHVVNDETVKVDANQKIEVGKDR
SVQVGKDETVKVDANQKVDVGKTIVIEAGTSIELKVGGSSVKIEPAKITLKSAQIAIEAD
GVISIKAGGVLTAEGALVKIN
NT seq 2046 nt   +upstreamnt  +downstreamnt
atgcagcccacccaagccaaccgccccgtcaccgtcacgtccgccctgggtgcggacgtg
ctgctgtttcgccgcatgcagtgcagcgaggcgctgggacagctgttcgagttccgcgtg
cagctcgagtcctcccgtgccgatatcgccacggcggacgtgctgggccagccgctgacg
gtcacgctggacctggaggaaggcggcgagcggcacttccacgggatcgtgacgcgcttt
gcctacctgggctggcgcgacggcatgccggcctgggaggcaatcgtgcaccccgcgctg
tggctgctgacgcgctcgtccgactgccgcatcttccaggacaagaccgcgctggagatc
gtcaaggcggtgtgcggcgacggctgctatggcgggttgatcaagatcgatgcgggcaag
ctgtcgtccacgccggccaagcgcgagttctgcgtgcagtatcgtgagtccgacttcgac
ttcgtcagccggctgctggaagaagagggcatctactactatttccggcatgaggcgggc
gcgcacacgatggtgctggcggacggctacggcgcccacgccagcgccgccggctatgcc
acgctgccgttctgggacgaacaggagggccggcgcgcgcccgggaaggcggtgtcgcgc
atgtggcccgccggcgccgtgcagagcggcgagtacgccctcaacgattatgacttcgag
cagcccgccgccattcgcaacgcgggcctgctggtgaagtcggccatcgccgcgccgtac
accgcccagcgcttccgtcagtacgactacccgggccgctacaaggcggcgggggcgggc
gaaagccgggcccgggcgcggatggaggcgctgcatggccagggcgagcaggtggacggc
gcgaccaacgcgcgtggcatcggtgccggcgccctgttcaagctggccgagcacccgcgt
gcggaccagaaccgcgagtttctcgtcaccgccacggcaatcgagttcgccagttccgcc
tacggcagcggcggcacacagggggcgttcgagttccagtgctcgttccaggcggtgggc
aaggagcacagctaccggccaccgcgcagtgccgcccggcccttcgtgcacggcccgcag
acggccatcgtggtcggcaaggcgggcgaggaaacctggaccgacaagcatggccgcatc
aaggtgcagttccactgggagcgcgagcgccacgacgacgacaccagctcgtgctgggtg
cgcgtgcagcagggctgggccggcaagggctggggcacgatgttcataccccgtatcggc
atggaagtggtggtcagttttctcgagggcgatcccgaccagccgctggtgacgggctgc
gtctacaacgccgacaccgtcgtaccgtacgatctgccggcccaccagacccgctcgacg
atcaagaccaacagctcgaagggcggtggcggctacaacgagctgcgcttcgaggacaag
aagggcgccgaggaactctacatccaggccgagaaggactgcaaccgcgtggtgaagaac
aacgacacgctgaaggtgggtttcgagaagaaggacaagggcgaccagacgatcgcgatc
tgccacgaccagagcatcgacgtgggcaacgaccgcaaggtccacgtggtcaacgacgaa
accgtcacggtcgatgccaaccagaagctcgacgtcggcaaggaccgcagcgtccacgtg
gtcaacgacgaaacggtcaaggtggacgccaatcagaagatcgaggtcggcaaggaccgc
agcgtccaggtgggcaaggacgaaacggtcaaggtggatgccaaccaaaaggtcgacgtg
ggcaagaccatcgtcatcgaggcgggcacgtcgatcgaactgaaggtgggcggcagcagc
gtcaagatcgagccggcgaagatcacgttgaagtcggcgcagatcgccatcgaggccgac
ggcgtcatctcgatcaaggccggcggcgtgctgacagccgagggtgccctcgtgaaaatc
aactga

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