Pseudoduganella chitinolytica: PX653_05600
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Entry
PX653_05600 CDS
T08857
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
tct
Pseudoduganella chitinolytica
Brite
KEGG Orthology (KO) [BR:
tct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tct03009
]
PX653_05600
Ribosome biogenesis [BR:
tct03009
]
Prokaryotic type
ribosomal protein modification factors
PX653_05600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
WEF34245
LinkDB
All DBs
Position
1264659..1266857
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AA seq
732 aa
AA seq
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MEIKVNFLDKLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCD
TRNIPTENIRLSQNNIVDPENRYAQIFKIQVELPADISDKDRQGILRSIDRCTVKKVVQQ
GPEFVIEEVESLDADAQALLTLQPGGDSATYIPGKDLPLEQTIANMSGLLAGLGIKIEIA
SWRNIVPNVWSLHIRDAHSPMCFTNGKGATKESALASALGEYIERLSANHFYAGAYWGAD
LANADFVHYPNERWFKPRRKDALPEEILDEYCLEIYDPDGELRASHLVDTNSGNVARGIC
SLPFVRQSDGATVYFPSNLVENLYASNGMSAGNTLAEAQVQCLSEIFERAVKREIIEGEL
ALPDVPAEVLAKYPRILAGIQALEEQGFPVLVKDASLGGEYPVMCVTLMNPRTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDLPPPTFASAAVTEPYNFVEHFIDSSGIVSWRF
FSAKADYDFVEWDFTSAGENANAEEAARLLGLLANAGKEVYIAEYNELGAVACRILVPGY
SEIYPVEDLVWDNTNKSLLFREDILNLHRLDDKQLEALLDRLENNELDEYSDIATLIGIE
FDENTEWGQLTVLELRLLINLALGRFEDAHDLVGAFLQYNDNTVERRLFYQALNVVLEVA
LDDDLDIDDYVANFRRMFGNARMDAALGSVDGSVRFHGLTPVGMDLAGLDRHQRLLDSYR
KLHKARAAAAAK
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaattttctcgacaagctccgcctggaagcgaagttcgacgacttc
acggtcatcgccgaccagcccatccgctacaagggcgacggctccgcgcccggtccgttc
gactacttcctggcctcgtcggccttgtgcgcggcctatttcgtcaagctgtactgcgac
acgcgcaatatcccgaccgagaacatccgcctgtcgcagaacaatatcgtcgatccggaa
aaccgctacgcgcagatcttcaagatccaggtcgaactgccggccgatatctccgacaag
gaccgccagggcatcctgcgctcgatcgaccgctgcacggtgaaaaaagtggtgcagcag
ggcccggagttcgtcatcgaggaagtggaaagcctggacgccgatgcgcaggcgctgctg
acgctgcagccgggcggcgacagcgccacctacatccccggcaaggacctgcccctggag
cagaccatcgccaatatgtcgggcctcctggcgggcctgggcatcaagatcgaaatcgct
tcctggcgcaatatcgtgccgaacgtctggtcgctgcacatccgcgatgcccactcgccc
atgtgcttcaccaacggcaagggcgcgaccaaggagagcgcgctggcttccgcgctgggc
gaatacatcgagcgcctcagcgcgaatcacttctatgccggcgcctactggggcgcggac
ctcgccaacgccgacttcgtgcattacccgaacgagcgctggttcaagccgcgccgcaag
gatgcgctgcccgaggaaatcctcgacgaatactgcctggagatctacgatccggacggc
gagctgcgtgcctcgcacctggtcgacacgaactccggcaacgtcgcgcgcggcatctgc
tcgctgccgttcgtgcgccagtccgatggcgccacggtgtacttcccgtcgaatctcgtc
gagaacctgtacgccagcaatggcatgagcgccgggaacacgctggccgaggcgcaggtg
cagtgcctgtccgagatcttcgagcgggccgtcaagcgcgagatcatcgaaggcgaactg
gcgctgccggacgtccctgcggaggttctggcgaaatacccgcgcatcctggccggcatc
caggcgctggaagagcagggcttcccggtgctcgtcaaggatgcatcactgggcggcgaa
tatcccgtcatgtgcgtgacgttgatgaatccgcgcaccgggggtgtgttcgcgtcgttc
ggcgcgcacccgagcttcgaggtggcactggagcgcagcctgacggagctgctgcagggc
cgcagcttcgaaggcctgaacgacctgccgccgccgacctttgccagcgcggccgtgacg
gagccgtacaacttcgtcgaacacttcatcgattccagcggcatcgtgtcgtggcgcttc
ttcagcgcgaaggcggactacgacttcgtcgagtgggatttcaccagcgcgggcgagaac
gccaacgccgaggaagcggcccggttgctgggcctcctggccaacgccggcaaggaagtc
tatatcgccgaatacaacgaactgggcgcggtggcctgccgcatcctggtgccaggctac
tcggagatctatccggtcgaggacctggtgtgggacaacaccaataaatcgctgctgttc
cgggaagacatcctgaacctgcaccgcctggacgacaagcagctggaagcgctgctggac
cggttggaaaacaacgagctggacgaatactccgacattgccaccctgatcggcatcgag
ttcgacgagaacacggagtggggccagctgacggtgctggaactgcgcctcctgatcaac
ctggcgctggggcgcttcgaggacgcgcacgacctggtcggcgccttcctgcagtacaac
gacaataccgtcgaacgccgcctgttctaccaggccctgaacgtggtgctggaagtggcg
ctggacgacgacctggacatcgacgactacgtcgccaacttccgccgcatgttcggcaat
gcgcgcatggacgccgccctgggctcggtcgacggcagcgtgcgcttccacgggctgacg
ccagtcggcatggacctggcgggcctggaccgccaccagcgcctgctggacagctatcgc
aagctgcacaaggcccgcgcggcggccgcagcgaaataa
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