KEGG   Pseudoduganella chitinolytica: PX653_05680
Entry
PX653_05680       CDS       T08857                                 
Symbol
tssI
Name
(GenBank) type VI secretion system tip protein TssI/VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
tct  Pseudoduganella chitinolytica
Pathway
tct03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:tct00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PX653_05680 (tssI)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tct02044]
    PX653_05680 (tssI)
Secretion system [BR:tct02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PX653_05680 (tssI)
SSDB
Motif
Pfam: Phage_GPD Phage_base_V Gp5_trimer_C DUF2345 Sarcoglycan_1 DUF6484 Arabinose_bd
Other DBs
NCBI-ProteinID: WEF34261
UniProt: A0ABY8BEC2
LinkDB
Position
1285487..1288015
AA seq 842 aa
MSSESLDSPAKAGLVPQGAAKPSDLPAAGKLAVSAAALAGVDAKALGVASTALDTASLLQ
AGAGASALASGAVGLAGLANPQLGQALQVASQVQSLAQKSDALSAPAQQAAALVKEAPTA
LAETAGAVEKLVIAEHPLAGQAVSDFAVAEAPFVPPAIDPAGQGDVATAAASALAQFSDG
RRLLRFYSPLAGDKALLIESLSGTAAISEQFSFNLSLISENAGIDLKDMMGKNVSVSVQL
ADGSEHFINGYVHSFGFSHSDGGFAFYHAQIVPWLSYLKQRVNSRIFQDQSVLEVLDAVF
KGDYNGLANYEFRTGQTYKPENFIVQYDETDEHFVCRLMERHGLFYYFEHRPNGHVMVIS
DDSRSAAFCPPQEDHAEVEFNGGNRWHDQDSVTALAAERKLQSTKVALNTFDFKSPNTLQ
YVEVPTVTRQGDMPTMEIYDGNPAFSYRDKDDGQREARQRLEVLEWQAKVFAGASDCRGL
VAGHTFKLLGHHWFDPTGEGDNDFLVLSVQYNARNNYFERGQSDVYRNTFTAIRRKIPYR
PRRAHPAPRMPGPQSATVVGPKGTEIHTDKFGRIKVQFHWDRYGRRDERSSCWIRVSQPW
AGQGWGTISIPRIGQEVIIDYLEGDPDRPVCTGRLFNADQPAPYGLPDGAHMMGFKSRST
PGGGGFCEMVIHDQKGKELINIHSQKDMVTTVQNTQATVVNGPHQTNTVSSGFQTNTVKQ
YIVTTAQTGHIHETAKTNIEMTAQDAHIHQTARTNIELTAQDDYIHQTAKTNIELVAQNA
HLHQTAKQNIELTSQTEHIHLKANTDITLEVGASKIVLQQDGTILIQGVNVAVMGSRIDL
NK
NT seq 2529 nt   +upstreamnt  +downstreamnt
atgtcatcagaatcgctcgatagcccggccaaggccgggctcgttccccaaggagccgcg
aagccgtccgacctgccggccgccggcaaactggcggtcagcgcggcagccctggccggt
gtcgatgccaaggcgcttggcgtggccagtaccgcgctcgacacggccagcctgctgcag
gccggcgccggggcgtcggccctggcaagcggcgcggtcggtcttgccggccttgccaat
ccccagctggggcaggcactgcaggtggcatcgcaagtccagtcgttggcccagaaaagc
gacgccttgagcgcgccggcgcaacaggccgcggcgctggtcaaggaagcgccgacggcg
ctggcggaaacggcaggcgcggtggaaaagctcgtgatcgccgagcacccgctggcggga
caggccgtcagcgatttcgccgtagccgaggcgccattcgtgccgcccgccatcgatccg
gccgggcagggcgacgtggcgacggcagccgccagtgcgctggcgcagttcagcgacggc
cgccgcctgctgcgcttctactcgccgctggcgggcgacaaggcgctgctgatcgagtcg
ctgagcggcaccgccgcgatctccgagcagttctcgttcaacctcagcctgatctcggaa
aacgccgggatcgacctgaaggacatgatgggcaagaatgtcagcgtcagcgtccagctg
gccgacggcagcgagcacttcatcaacggctacgtccattcgttcggcttcagccactcg
gacggcggcttcgcgttctaccacgcccagatcgtcccctggctgagctacctgaagcag
cgcgtcaactcgcgcatcttccaggaccagagcgtgctcgaggtgctggacgccgtcttc
aagggcgactacaacggcctggccaactacgagttccgcaccggccagacctacaagccg
gaaaacttcatcgtccagtacgacgagacggacgagcatttcgtctgccggctgatggaa
cgccatggcctgttctattacttcgagcacaggccgaacggccacgtgatggtcatcagc
gacgattcgcggtcggccgcgttctgtccgccgcaggaagaccatgccgaggtggaattc
aacggcggcaaccgctggcacgaccaggacagcgtcacggccctggccgccgaacgcaag
ctgcagtcgaccaaggtcgcgctcaatacgttcgacttcaagtcgccgaacacgctgcaa
tacgtggaagtcccgaccgtcacccggcagggcgacatgccgacgatggaaatctacgac
ggcaacccggccttctcgtacagggacaaggacgacggccagcgcgaggcgcgccagcgc
ctggaggtgctggagtggcaggccaaggtgtttgccggggcatccgactgtcgcggcctg
gtggccggccatacgttcaagctcctgggccatcactggttcgaccccacgggggagggc
gacaacgacttcctcgtcctgtcggtgcagtacaacgcccgcaacaactatttcgaacgg
ggccagagcgacgtctaccgcaataccttcacggccatccgccgcaagatcccgtaccgg
ccgcgccgcgcccatccggcgccgcgcatgccgggcccgcaatcggccacggtagtgggg
ccgaagggtacggaaatccataccgacaagttcggccgcatcaaggtgcaattccactgg
gaccgctacggccgccgcgacgagcgcagctcctgctggatccgcgtgtcgcagccgtgg
gcggggcagggctgggggacgatctcgattccccgcatcggccaggaagtgatcatcgac
tacctggaaggcgatcccgaccgccccgtctgcacgggccgcctgttcaacgccgaccag
ccggccccgtacggcctgccggacggcgcccacatgatgggcttcaagagccgctccacg
ccgggtggtggcggcttctgcgagatggtgatccacgaccagaagggcaaggagctgatc
aatatccattcgcagaaggatatggtcacgaccgtgcagaacacgcaggcgacggtcgtc
aacggaccgcaccagaccaacacggtcagcagcggctttcagaccaacacggtcaagcag
tacatcgtgacgacggcgcagacgggccacatccacgagacggccaagacgaacatcgag
atgacggcgcaggatgcgcacatccaccagacggccaggaccaatatcgagctgacggcg
caggacgactacatccaccagaccgcgaagacgaatatcgagctggtggcgcagaacgcc
cacctgcaccagacggccaagcagaacatcgagctgacgtcgcagacggagcacatccac
ctgaaggccaacacggacatcacgctggaagtgggcgccagcaagatcgtgctgcagcag
gacggcacgatcctgatccagggcgtcaacgtcgccgtgatgggcagccggatcgacctg
aacaaatga

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