Pseudoduganella chitinolytica: PX653_06025 Help Entry PX653_06025       CDS       T08857                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism tct  Pseudoduganella chitinolytica Brite KEGG Orthology (KO) [BR:tct00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:tct03400]     PX653_06025 Enzymes [BR:tct01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      PX653_06025     5.6.2.6  RNA 3'-5' helicase      PX653_06025 DNA repair and recombination proteins [BR:tct03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     PX653_06025 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WH_Lhr WH4_Lhr DEAD Helicase_C WH3_Lhr ResIII Cas3-like_C_2 PhoH AAA_25 MarR_2 MarR HTH_IclR HTH_27 DprA_WH Motif Other DBs NCBI-ProteinID:  WEF34329 LinkDB All DBs Position complement(1375445..1379782) Genome browser AA seq 1445 aa AA seqDB search MAPDPLHDFHPAVAAWFRAAFAGATEAQRRAWPLVQAGRTTLIAAPTGSGKTLTAFLAAI DALVRESAQAPLPDETRVLYVSPLKALSNDIRVNLLAPLEGIDAQLAALDLPPHGIRSAV RTGDTPQAERNAARRRPPHILVSTPESLYVLLGSDSGRAMLATVRTVIVDEIHAVAGGKR GSHLALSLERLDALLARPAVRIGLSATQKPIAVVAQFLAGAERPCAIVDVGHVRERDLGL ELPPVPLEAVMPNEVWDRVYDRLAELAALHRTTLVFVNTRRMAERMARHLGDRLGAEHVT AHHGSLAKEFRLDAEQRLKRGELRMLIATASLELGIDIGDVDLVCQVGSPRSIAAFLQRV GRSGHHVGGLPKGRLFPTSRDDLIECAALLDCVRRDELDALRIPVAPLDVLAQQIVAEAG LREWGEDALFDLIRGATPYAALPRERFEAVLRMLVEGYYSRQGVRGAWLHRDTVSGTVRG RRGGKLAAVMSGGTIPDNADFTVLLEPAGLNVGTVHEDFAVESLAGDVFQLGNTSYRILR VEAGKVRVEDARGAAPNIPFWLGEAPGRSDELSLGVARLRGEIDRLLGERDDGAAAIEHA VQWLFEHLGLDDDAARQIVEYLARARAALGALPTAATLVLERFFDESGGMQLVLHSPYGS RINRAWGLALRKRFCRTFNFELQAAATEDAIVLSLSDSHSFPLDEVWRYLRSNSAQHVLV QALLDAPLFNVRWRWNATTALALPRFAGGRKVAPQLMRMKSDDMLAAVFPDQAACLENIA GEREIPSHPLVDQTLDDCLHEAMDAEGWLALLRRMEAGQVTLLARDLPAPSPLAMEILNA RPYAFLDDAPLEERRTQAVLNRRWTEPTSTDDLGALDAGAIESVATESWPAVRNSDEMHE ALVALACVTVDEAAANDGWPAWLAALAAGGRATRLDRLWVALERLTCVQAAWPDAVPAPP LAVPERLALAGDEPWTRDAALVEVLRARLSGFGPQTLAAIAAPLRLPEGTVASALAQLEA QGYVLRGRFTPGAAAEQWCERHLLARIHRYTIRHLRREIEPVERRDFMRFLFEWQHVAPD ARLQGGDALAQVLAQLEGYEAAAGAWESELLATRVRDYSQLYLDELCRAGRIVWTRVGAP ASASGGPVRGTPLVLLPRRQLGLWHALPAVAGEVALSARALRVVDALRRHGAMFFDELAH DARLLGTELEDALGELVATGLVNADSFAGLRAMLVPAARRNTMDRRRRKGAGPTMEEAGR WALVRRADGVTLVERSADTAPPAPAPSRRPRTEPETLEHIALTLLRRYGVMFWHLLEREA AWLPAWRELLPVYHRLEARGEIRGGRFVAGLSGEQFALPEAIALLRDMRRREHDGSLVAV SGVDPLNQCGTLLPGDKVPALAGNRALFRDGVPVATLVAGKFHYLGTPTPAEREAWHGAL VGRTG NT seq 4338 nt NT seq  +upstreamnt  +downstreamnt atggcgccggacccgctgcacgatttccaccccgccgtcgcggcgtggttccgcgccgcc tttgccggcgccaccgaggcccagcggcgcgcctggccgctggtgcaggccggccgcacc acgctgatcgccgcgcccacgggctcgggcaagacactgacggcgttcctggccgccatc gacgcgctggtgcgcgaaagcgcccaagcgccgctgccggacgagacgcgcgtactgtac gtgtcgccactgaaggcgctgtcgaacgacatccgcgtcaacctgctggccccgctggag gggatcgatgcgcaactggccgcattggacctgccgccgcacggcatccgcagcgccgtg cgcacgggcgacaccccgcaggccgagcgcaacgcggcgcgcaggcgcccgccccatatc ctggtctcgaccccggaatcgctgtacgtgctgctgggcagcgactccggccgcgccatg ctggccaccgtgcgcaccgtcatcgtcgacgagatccatgcggtggccggcggcaagcgc ggcagccacctggcgctcagcctggaacggctcgacgcactgctggcccggccggcggta cgcatcggcctgtccgccacccagaaacccatcgccgtcgtcgcgcagttcctggccggc gcggagcggccgtgtgccatcgtcgatgtcggccacgtgcgggagcgcgacctgggcctg gagctgccgcccgtgccgctggaggccgtgatgccgaacgaggtgtgggaccgggtctac gaccggctggcggaactggccgcgctgcaccgcaccaccctcgtcttcgtcaatacgcgc cggatggcggagcgcatggcgcgccacctgggcgaccgcctgggtgccgaacacgtgacg gcgcaccacggcagcctggccaaggagttccgcctggacgccgagcagcgcctgaagcgg ggcgagctgcgtatgctgatcgccacggcctcgctggagctgggcatcgacatcggcgac gtcgacctggtgtgccaggtcggctcgccgcgcagcatcgccgccttcctgcagcgggtc ggccgctccggccaccacgttggcggcctgccgaaggggcggctgttccccacgtcgcgc gacgacctgatcgaatgcgcggcactgctggactgcgtgcgccgcgacgaactcgacgcg ctgcgcatccccgtcgcgccgctggacgtgctggcgcagcagatcgtggccgaagcgggc ctgcgcgaatggggcgaggacgcgctgttcgacctgatacggggcgccacgccttatgcg gccctgccgcgcgagcgcttcgaggccgtgctgcgcatgctggtcgagggctactacagc cgccagggcgtgcgcggcgcctggctgcaccgcgataccgtcagcggcacggtgcgcggc cggcgcggcggcaagctggccgccgtgatgtcgggcgggacgatccccgacaacgccgac ttcacggtcctgctggaaccggccggcctgaacgtgggcaccgtgcacgaggacttcgcg gtcgaaagcctggccggcgacgtgttccagctggggaacacgtcataccgcatcctgcgc gtggaagcgggcaaggtgcgtgtcgaggatgcccgcggcgccgcacccaacatcccgttc tggctgggcgaagcgcccgggcgcagcgacgagctgtcgctgggcgtggcgcgcctgcgc ggcgagatcgaccgcctgctgggtgagcgcgacgacggcgccgccgccatcgagcatgcc gtgcagtggctgtttgaacacctgggcctggacgacgacgcggcgcgccagatcgtcgag tacctggcacgcgcccgcgccgcgctgggcgcgctgcccaccgcggccacgctggtgctg gagcgcttcttcgacgaatcgggcggcatgcagctggtgctgcactcgccctatggcagc cgcatcaaccgggcctgggggctggcgctgcgcaagcgcttctgccgcacgttcaacttc gagctgcaggccgccgcgacggaggatgcgatcgtgctgtccctgtcggacagccacagt ttcccgctcgacgaggtgtggcgctacctgcgctcgaacagcgcgcagcacgtgctggtg caggcattgctggatgcgccgctgttcaacgtgcgctggcgctggaacgccaccacggcg ctggccctgccccgcttcgccggcgggcgcaaggtggcgccgcagctgatgcgcatgaag agcgacgacatgctggccgccgtgttccccgaccaggcagcgtgcctggagaacatcgcg ggcgagcgcgagattcccagccatccgctggtggaccagacgctggacgactgcctgcac gaggcgatggacgccgaaggctggctggcgctgctgcgccgcatggaagcgggccaggtc acgctgctggcacgcgacctgccggcgccgtcgccgctggcgatggagatcctgaatgcg cgcccgtatgccttcctcgatgacgcaccgctggaggaacggcgcacccaggcggtgctg aaccggcgctggaccgaaccgacgtccaccgacgacctgggggcgctggacgcgggcgcc atcgagtccgtcgcgacggaaagctggcccgccgtgcgcaacagcgacgagatgcacgag gcactggtggcgctggcctgcgtcaccgtcgacgaagcggccgcgaacgacggctggccc gcatggctggcggcgctggccgccggcggccgggccacacggctcgaccggctgtgggtg gcgctggaacggctgacgtgcgtgcaggcggcctggccggacgccgtgccggcaccgccg ctggccgtgccggagcgcctggcactggccggcgacgaaccttggacgcgcgacgccgcg ctggtggaagtcctgcgtgcccgcctgtccggcttcgggccgcagacattggccgccatc gcggcgccgctgcggctgccggagggcacggtggcgagcgcgctggcgcagctggaagcg caaggctacgtgctgcgcgggaggttcacgccgggggcggcggccgagcaatggtgcgag cgccacctgctggcgcgcatccaccgctacacgatccgccacctgcggcgcgagatcgaa cccgtcgagcggcgcgatttcatgcgtttcctgttcgagtggcagcacgtggcgccggat gcccgcctgcagggcggcgacgcgctggcccaggtgctggcccagctggaaggctacgag gcggccgccggcgcgtgggaaagcgaactgctggcaacgcgggtgcgcgactattcgcag ctgtacctggacgaactgtgtcgcgccggtcgcatcgtctggacgcgggtgggcgcgccg gccagcgccagcggcggtcccgtgcgcggcacgccgctggtgctgctgccgcgccgccag ctgggcctgtggcacgcgctgccggcagtcgccggcgaagtggcgctgtcggcccgcgcg ctgcgcgtggtggacgcgctgcgccggcatggcgccatgttcttcgacgagctggcgcac gacgcccgcctgctgggcaccgaactggaagacgcgctgggcgagctggtggcgacaggc ctcgtcaatgcggacagtttcgccggcctgcgcgccatgctggtgccggcggccaggcgc aacacgatggaccgccgccgtcgcaagggggccgggccgaccatggaggaagcgggccgc tgggcactggtgcggcgcgccgatggcgtgacgctggtcgaacgctcggcggacaccgcg ccacccgcaccggcaccgtcgcgccgcccgcgcacggagccggagacgctggagcacatc gcgctgaccttgttgcgccgctacggcgtcatgttctggcacctgctggaacgggaagcg gcctggctgcccgcctggcgcgagctgctgcctgtctaccaccgcctggaagcgcgcggc gagatccgtggcggacgcttcgtcgccggcctgtcgggcgagcagttcgcgctgcccgag gcgattgcgctgctgcgcgacatgcgccggcgcgagcacgacggcagcctggtggcggtc tcgggcgtcgatccgctgaaccagtgcggcaccctgctgccgggcgacaaggtgcctgcg ctggcgggcaaccgcgcgctgttccgcgacggcgtgcctgtcgccacgctcgtcgccggc aagttccactacctcggtacgcccacgcccgcggagcgggaggcatggcatggcgcgctg gtgggccgaactggctga

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