KEGG   Pseudoduganella chitinolytica: PX653_07745
Entry
PX653_07745       CDS       T08857                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
tct  Pseudoduganella chitinolytica
Brite
KEGG Orthology (KO) [BR:tct00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tct02044]
    PX653_07745 (tssC)
Secretion system [BR:tct02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PX653_07745 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: WEF34644
UniProt: A0ABY8BK57
LinkDB
Position
complement(1780353..1781840)
AA seq 495 aa
MSVQATQAGAAAVTTTEAGLLDQIVEQSKVAKSSAEHARAKDLISELVSQVMDGTVVVSD
NLAATIDARVAELDRLISAQLSAVMHAPEFQKLESSWTGLNYLVRNSSTSQNLKIKMLNA
TKRELVKDFQSALEFDQSTMFKKVYEEEFGTFGGAPFGALLGDFEITRQPEDMYFIEQMS
HVAAAAHAPFISSASPELFGLESYSELGKPRDLSKIFDTVEYAKWKSFRESEDSRYVGLT
LPRFLGRLPFNPADGATTEGFNFVEDVDGTDHQKYLWCNAAYAFGTKLTAAFEDYGWCAA
IRGVEGGGLVEDLPTHTFKTDEGEVALKCPTEIAITDRREKELSDLGFISLVHCKNTDYA
AFFGAQSAQKPRKYNNDAANANAVLSAQLQYIFAVSRIAHYMKAMMRDKIGSFAAASNVE
DFLNRWLTQYVLLDDNASQEQKAQFPLREASVQVSEVPGRPGVYRAVSFLRPHFQLDELS
VSLRLVAELPASTKT
NT seq 1488 nt   +upstreamnt  +downstreamnt
atgtccgtacaagccactcaagccggcgccgccgccgtcaccaccaccgaggctggcctg
ctcgaccagatcgtcgaacagagcaaggtcgccaagtccagcgccgaacatgcacgcgcc
aaggacctgatttccgagctggtcagccaggtcatggacggcaccgtcgtcgtctccgac
aacctggccgccacgatcgatgcgcgtgtcgccgaactggaccgcctgatttcggcgcag
ctgtcggccgtgatgcacgcgcccgaattccagaagctggaaagcagctggacgggcctg
aactacctcgtgcgcaacagctcgacgagccagaacctgaagatcaagatgctcaacgcg
accaagcgcgaactggtgaaggacttccagagcgccctggagttcgaccagagcacaatg
ttcaagaaggtctacgaggaggagttcggcaccttcggcggcgccccgttcggcgcgctg
ctgggcgacttcgagatcacccgccagccagaggacatgtacttcatcgagcagatgtcg
cacgtcgcggcggccgcgcatgcgccgttcatctcgtccgcgtcgcccgagctgttcggc
ctggagagctactccgagctgggcaagccgcgcgacctgtcgaagatcttcgataccgtc
gaatacgccaagtggaagtcgttccgcgagtccgaggattcgcgctacgtgggcctgacc
ctgccgcgcttcctgggccgcctgccgttcaacccggccgacggcgccacgacggaaggc
ttcaacttcgtcgaggacgtggacggcaccgaccaccagaaatacctgtggtgtaacgcc
gcctatgcgttcggcaccaagctgacggccgcgttcgaggactacggctggtgcgcggcg
atccgcggtgtcgaaggcggcggcctggtcgaggacctgccgacccacaccttcaagacc
gacgaaggcgaagtcgcgctgaagtgcccgaccgagatcgccatcaccgaccggcgcgag
aaggaattgtccgacctgggtttcatctcgctggtccattgcaagaacaccgactatgcc
gctttcttcggcgcgcagtcggcgcagaagccgcgcaagtacaacaacgacgccgccaac
gcgaacgccgtgctgtcggcccagctgcagtacatctttgccgtatcgcgcatcgcgcac
tacatgaaggccatgatgcgcgacaagatcggcagctttgccgccgcgtcgaacgtcgag
gacttcctgaaccgctggctgacgcagtacgtgctgttggacgacaacgccagccaggaa
cagaaagcccagttcccgctgcgcgaggcgtccgtacaagtttccgaagtgccgggccgg
ccgggcgtgtatcgcgccgtgtcgttcctgcgtccgcacttccagctcgacgagctgtcc
gtatccctccgtctggtcgcggagcttccagcatcgaccaaaacttaa

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